Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6291 |
Symbol | |
ID | 8362473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7924689 |
End bp | 7925828 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968418 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003125897 |
Protein GI | 256425244 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTC AACTTACTGA AGAACACCTC ATGATACAAA AGGCGGCCCG TGATTTCGCC GTCAATGAAT TGCTCCCCGG CGTAATAGAA CGTGACGAAA AGCAGATCTA CCCCGCAGAA CAGATCAAAA AACTGGGTGA ATTAGGCTTT CTGGGTATGA TGGTAGACCC GAAATATGGT GGCGCCGGAC TGGATACCGT ATCCTATGTG CTGGCCATGG AAGAGATCTC CAAAATAGAT GCCTCCACCT CCGTATGTAT GAGTGTGAAT AACTCACTCG TTTGCTGGGG ACTGGAAACC TACGGTACCG AAGAGCAAAA GCAGCAATAT CTCGTTCCCC TGGCCAAAGG GGAGATTACC GGCGCATTCC TTTTGAGTGA ACCGGAAGCA GGTTCCGACG CGACCTCTCA ACGCACCAAA GCAGAAGATA AAGGTGATCA TTACCTGGTA AACGGTACCA AAAACTGGAT CACCAATGGA AGTAGTGCCA GCGTATACCT GGTTATCGCA CAGACCCACG TCGAAAAAGG CAGTAAAGGG ATCAATGCCC TGATCATCGA AAAGAACTCG CCGGGTGTTG TCGTGGGCGC AAAAGAGAAT AAAATGGGTA TCCGCGGTAG TGATACGCAT AGTATTATGT TTCAGGACGT AAAAGTGCCG AAAGAGAACA GGATAGGAGA GGACGGTTTC GGCTTCAAAT TCGCCATGAA AACACTGGCA GGCGGTCGTA TCGGTATTGC TTCCCAGGCA TTGGGCATCG CCAGCGGCGC TTATGAACTG GCCGTTAAAT ACGCGAAGGA AAGAAAAGCC TTTGGTAAAG AGATCAGTCA GCACCAGGCC ATTCAGTTCA AACTGGCGGA TATGGCTACC CGTATAGAAG CTTCCAGACT GTTATGCCTG AAAGCAGCCA GAGAGAAAGA CCTGCATCTG GACTATACCC TCAGCGGTTC TATGGCAAAA GTATTTTCAT CGGAAACTGC TATGTGGGTG ACCACAGAAG CGGTACAGGT ACACGGTGGT TACGGTTATG TGAAAGAGTA CCATGTGGAA CGCCTCATGC GTGACGCGAA GATCACACAG ATCTATGAAG GCACCAGCGA AGTACAGCGT ATCGTAATCG GCAGAGCGAT TTTAGGTTAA
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Protein sequence | MDFQLTEEHL MIQKAARDFA VNELLPGVIE RDEKQIYPAE QIKKLGELGF LGMMVDPKYG GAGLDTVSYV LAMEEISKID ASTSVCMSVN NSLVCWGLET YGTEEQKQQY LVPLAKGEIT GAFLLSEPEA GSDATSQRTK AEDKGDHYLV NGTKNWITNG SSASVYLVIA QTHVEKGSKG INALIIEKNS PGVVVGAKEN KMGIRGSDTH SIMFQDVKVP KENRIGEDGF GFKFAMKTLA GGRIGIASQA LGIASGAYEL AVKYAKERKA FGKEISQHQA IQFKLADMAT RIEASRLLCL KAAREKDLHL DYTLSGSMAK VFSSETAMWV TTEAVQVHGG YGYVKEYHVE RLMRDAKITQ IYEGTSEVQR IVIGRAILG
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