Gene Cpin_6267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6267 
Symbol 
ID8362449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7899655 
End bp7900050 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content52% 
IMG OID644968395 
Productprotein of unknown function DUF423 
Protein accessionYP_003125874 
Protein GI256425221 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.015945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.442233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGG GATTTCTCAT CATCGCATCG GTATTAGGTG CGCTGGCCGT AACATTGGGC 
GCTTTCGGCG CACATAAGCT GAAAGAGCTT GTACCACCGG AAACAGTCGG CACATTTCAG
ACAGGCGTTA CTTATCAGTT CTATCATACC TTCGCCCTCC TGGCAGTAGG TATCCTCTTT
GCTCACCTGT CGCCTGCCGC TGGTGGTTTG CTCGAATGGG CCGGCCGCTG CTTCTTTATC
GGCGTAATAC TGTTCTCCGG CTCGCTCTAC ATCCTGACCA TGCTGAAAGC TACGGAAACC
GTAGGTCTCA GCAAGATCGG TATTGTGACG CCTATCGGTG GACTCTTCTT TATCGCCGGC
TGGGTTTGTC TCATCCTGGC CTTACTGAAG AAGTAA
 
Protein sequence
MHKGFLIIAS VLGALAVTLG AFGAHKLKEL VPPETVGTFQ TGVTYQFYHT FALLAVGILF 
AHLSPAAGGL LEWAGRCFFI GVILFSGSLY ILTMLKATET VGLSKIGIVT PIGGLFFIAG
WVCLILALLK K