| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6236 |
|---|
| Symbol | |
|---|
| ID | 8362418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7856839 |
|---|
| End bp | 7857783 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644968364 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_003125843 |
|---|
| Protein GI | 256425190 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.215918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTA ACCAACAGGA ACATGTACAT TTATTGATAA TAGGTTCCGG ACCGGCAGGC
TACACTGCCG CTATATATGC CGCAAGAGCA AATCTTAAAC CTGTACTTTA CCAGGGTATT
CAACCGGGCG GTCAGCTGAC CATCACGACA GAAGTAGAAA ACTATCCAGG TTACCCGGAA
GGTGTTCAGG GACCTGAAAT GATGGTTGAC TTTGAAAAGC AGGCGACCCG TATGGGCGCT
GATATCCGCT TTGGTCTGGC TACATCCGTA GACTTCAGCA GCAAACCATA TAAAGTAACG
ATCGACGAAT CCAAAGTGAT GACGGCAGAT GCTATCATCA TCGCGACAGG CGCTTCTGCC
AAATGGCTGG GAATGCCTTC CGAACAACGT CTGAACGGTA GCGGTGTATC TGCCTGCGCT
GTTTGTGACG GGTTCTTCTT CCGTGGTAAA GAAGTAGCTA TCGTAGGTGC TGGTGATACC
GCTGCCGAAG AAGCACTGTA CCTGTCTAAA ATGTGCAGCA ACGTTCATAT GATCGTTCGC
CGTCATGAAA TGCGCGCTTC CAAAGTAATG CAGGACCGTG TACTGAAAAC TTCCAACATC
ATCGTATACT GGAATACTGA AACCCAGGAA GTACTGGGTG AAAATAAAGT GGAAGCAGTA
AAACTGCTGA ACACTGCCAA AAATGAAGAA ACTACCGTTC CGGTAAGCGC TTTCTTTGTG
GCGATCGGTC ACCAGCCAAA CTCCGCTATC TTCAAAGATT ACCTGGAGCT GGACGAACAG
GATTATATCA AAACCGTACC AGGGTCTTCC CGTACTAACC TGGAAGGTAT ATTCGCTTGT
GGCGATGTAC AGGATAAGAT CTATCGTCAG GCAGTAACAG CTGCGGGTAG TGGTTGTATG
GCCGCGTTAG ACGCAGAACG TTATTTATCA GCCCAGGGCA TATAA
|
|---|
| Protein sequence | METNQQEHVH LLIIGSGPAG YTAAIYAARA NLKPVLYQGI QPGGQLTITT EVENYPGYPE
GVQGPEMMVD FEKQATRMGA DIRFGLATSV DFSSKPYKVT IDESKVMTAD AIIIATGASA
KWLGMPSEQR LNGSGVSACA VCDGFFFRGK EVAIVGAGDT AAEEALYLSK MCSNVHMIVR
RHEMRASKVM QDRVLKTSNI IVYWNTETQE VLGENKVEAV KLLNTAKNEE TTVPVSAFFV
AIGHQPNSAI FKDYLELDEQ DYIKTVPGSS RTNLEGIFAC GDVQDKIYRQ AVTAAGSGCM
AALDAERYLS AQGI
|
|---|
| |