Gene Cpin_6212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6212 
Symbol 
ID8362394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7835726 
End bp7836217 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID644968340 
Productprotein of unknown function DUF520 
Protein accessionYP_003125819 
Protein GI256425166 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCT TTGATATTGT TAGCAAAGTG GATACACAGA CACTTGATAA TGCGATAAAC 
ACCGTTAAAA AGGAGATTAC CAACAGGTAC GACTTTAAAG ATTCGCATGT TACTATTGAA
TTGAATAAGA AGGAACTGGG CCTGACCATC GAGGTAGACA GCGATATGAA GCTGGGCCAG
GTAATTGACG TCCTGATCAG TCGTACGATG CGGCAGGGGC TGGACGGTAA CATTTTCGAT
CTGAGTAAGG AGCATTACCA GAGCGGAAAG GTGGTTAAAA AAGACGTTCC TATCAGAAAT
GGTATCAAAC AGGAAGATGC CAAGAAGCTG GTTAAATTGA TCAAAGATTC CGGGGCTAAG
GTACAGGCGG CCATTATGGA CGATATTGTA AGGGTGACCG GTAAAAAGAT CGATGATTTA
CAGGAGGTTA TACAGAAGAC GAAGGAAGCG AACTTAGGTA TTCCTTTACA GTATATAAAT
ATGAAGAGCT AA
 
Protein sequence
MPSFDIVSKV DTQTLDNAIN TVKKEITNRY DFKDSHVTIE LNKKELGLTI EVDSDMKLGQ 
VIDVLISRTM RQGLDGNIFD LSKEHYQSGK VVKKDVPIRN GIKQEDAKKL VKLIKDSGAK
VQAAIMDDIV RVTGKKIDDL QEVIQKTKEA NLGIPLQYIN MKS