Gene Cpin_6204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6204 
Symbol 
ID8362386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7827717 
End bp7828109 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID644968332 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003125811 
Protein GI256425158 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.783598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.478416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG CAAAAAATTA CAAGCCTACA GAAAGTGAAC TGGAGATCCT GGGAGTATTA 
TGGGAAAAAG GCGCAGGTAC TGTGAGGGAA GTGCATGAGA TATTAGAGAA AAGCAAAGAC
GCCGGTTATA CAACTACCCT TAAACTGATG CAGATCATGC ATGAGAAAGG GTTGCTCAAA
AGGGACACCA GCAGCAAGAC GCATGTCTAT GAAGCTGCGA TTTCCCAGGA AAGTACACAA
CAACAGTTAC TGACTAAAAT GATCGATACA GTGTTTAACG GATCTGCCAC CCAACTGGTG
ATGCAGGCAC TGGGTAATCA CCGTTCCTCA CAGGAGGAAC TGGATAGGAT CAAACAGTAC
CTGAATGAAA TAGAGCAACA ACAGAAAAAG TAA
 
Protein sequence
MSTAKNYKPT ESELEILGVL WEKGAGTVRE VHEILEKSKD AGYTTTLKLM QIMHEKGLLK 
RDTSSKTHVY EAAISQESTQ QQLLTKMIDT VFNGSATQLV MQALGNHRSS QEELDRIKQY
LNEIEQQQKK