| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6053 |
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| Symbol | |
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| ID | 8362235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7649849 |
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| End bp | 7651267 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968187 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003125666 |
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| Protein GI | 256425013 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.137627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAAGAC CCTGGCAATT AGAAATACAA CTCGACACTA CCGCCGACAA AGCAATCTAC
CTCCAGATCG CCGACGCGAT TATCAAAGAC ATTCACTCCG GCCGACTAAA AGCCGGCGAT
GCCCTCCCCG GCAGCAGAAA CCTCGCGCAA CTACTACATG TCAACAGAAA CACCGTAGTA
GAAGCATTCA ACGTACTGAT CAATGAAGAA TGGGTCGTAT CCCGCGAACG CAAAGGCATC
TTCGTATCTG CAGTACTCCC AGCCCTTATC CCGAAAAAAG ACAGTAACCA CCCGCCGGCA
GAGAAATCAG CAAAAGCACA AGGTCATCAT ATCAATTTCG ACGACGGCCA TCCAGACAGT
AAAATCGCAC CTATCACCGA ACTCGCCAGA GCCTACCGCC AGATCTTCAA CCAGAAAGCC
CGCTGGCAGA TGATGGGTTA TGGCGATGAA TATGGCGATA CCGACTTCCG GAAAGCTATT
GTCCAGATGC TGAACCAACA GAGAGGACTA GACACCCATG AACACGCTAT ATGCATTACA
AGGGGCAGTC AGATGGCCAT GTACCTGGCC ACCCAATGCC TGATAGAAAA AGGAGATTAT
GTAATGGTAG AAAATCCGGG CTATAAACCC GCCTGGCAAA CAGTAGCAAA CGCAGGAGCC
AAACTCCTGC CTGTCAGCGT GGACAAAGAC GGACTGATCA TAGAGGAAGT GATCGCTCAC
CTGCAGGCCC GTAAAAAGAT CAAAGCGATC TATACCACGC CGCACCGGCA ATATCCCACG
ACCGTGACCC TCAGCCTGCA ACGAAGACTG GAACTGGTGA AATTATCCAA CGAATACGGA
TTCACTATCA TTGAAGACGA CTATGACAAT GAATTCTGCT TCGGATACCG CCCTGTCCTC
CCGATTTCCA GTTTCCCTGA ACTGAAGAAC TATATCTATA TCGGCACCAT GAGTAAAGTC
GTAGCCCCTG CATTACGCAT CGGCTATCTC GTCAGCAATA ATCCGGAATT GATCGAAAAA
GTAGGAACAC TGCGAAAGAT CATCGATGTA CAGGGAGATA CAATCATGGA ACAGGCCGTA
CTGCAACTGA TCAAAGACGG CACTATAAAA AGGCATATCA GAAAAGCCAC CCATCACTAC
AAAGCCAAAA GAGACTTCAC TGCAGCACTG CTGGAAAAAC AAATAGGTGA TAAAGTGAGT
TATACACTTC CTGAAGGCGG ACTTGCCTTC TGGCTGACCC CGGAAAAAGA TATCAACTGG
ACTGAGGTAT TGGACAAACT AAAAGTCAAA GGCGTCAGCA TCATCCCTCC CGACACTTAT
AGCATCGATC AACCTGTCAA CGGTCTCAGA CTGAGCTATG GGTCACTTTC AGAAGAACAG
TTGACCGAAG GGATCACCCT ACTGGGTAAG TATCTCTGA
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| Protein sequence | MLRPWQLEIQ LDTTADKAIY LQIADAIIKD IHSGRLKAGD ALPGSRNLAQ LLHVNRNTVV
EAFNVLINEE WVVSRERKGI FVSAVLPALI PKKDSNHPPA EKSAKAQGHH INFDDGHPDS
KIAPITELAR AYRQIFNQKA RWQMMGYGDE YGDTDFRKAI VQMLNQQRGL DTHEHAICIT
RGSQMAMYLA TQCLIEKGDY VMVENPGYKP AWQTVANAGA KLLPVSVDKD GLIIEEVIAH
LQARKKIKAI YTTPHRQYPT TVTLSLQRRL ELVKLSNEYG FTIIEDDYDN EFCFGYRPVL
PISSFPELKN YIYIGTMSKV VAPALRIGYL VSNNPELIEK VGTLRKIIDV QGDTIMEQAV
LQLIKDGTIK RHIRKATHHY KAKRDFTAAL LEKQIGDKVS YTLPEGGLAF WLTPEKDINW
TEVLDKLKVK GVSIIPPDTY SIDQPVNGLR LSYGSLSEEQ LTEGITLLGK YL
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