| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6044 |
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| Symbol | |
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| ID | 8362226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7642530 |
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| End bp | 7644035 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968178 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003125657 |
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| Protein GI | 256425004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.845022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0554344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGGA CTAAAAAGTA TCTTGCTCTA CTGCTTTCGT TTGTTTGTCT GTCAATGTGT
GCCACGCTCC ACGCTCAGTC CACAACAGGC CCTGTTATCG CAGGCGACCT GGCAGATCCA
TCCATCATAA AAGTCGACAG CGTCTACTAT GCAACAGGTA CCTCCTCAGA ATGGGCGCCT
TATTATCCTG TCTACAAGTC GTCTAACCTG AAAGACTGGC GACAGACAGG CTACGTGTTT
GACAAAGCAC CGGATTGGAC AGTAGGCTCC TTCTGGGCGC CGGAATATTA TCAAATAGGC
GACACCTATT ACATGTATTA TACCGCCAGA CGAAAGTCGG ACAACCAATC CTTTATCGGT
GTCGCAACAT CCCGCTACCC CGATCATGGA TTTATTGACC ATGGCGTCAT CATCGAACAT
GGAAAAGAAG CCATCGATGC TTTTATCTAC GATGACAATG GCCAACGATA TATCACATTT
AAGGCATACG GACTGGAAAA CAGACCCATT GAAATACTTG GGTATAAATT GTCTGCCGAC
GGACTGAAAA CGGAAGGCGA AGCATTCACC TTACTGAAAG ATGATAACCG CGCAGGCATG
GAAGGACAAA GCATCCTGAA AAAAGATAAT TATTATTATC TCTTTTACTC TGCCGGCAAT
TGCTGCGGCG GTGGATGTAC CTATTCTGTA AACGTCGCCC GCTCCACCAG CTTCAAAGGC
CCTTATGAAT ACTTTACAGG CAACCCTGTC CTCAGTGAAA ACGACAGCTG GAAATGTATG
GGACACGGTA CCTTCGTTAC CGCTGATGAT AATCAGACCT ACTACCTGCA CCATGCGTAC
AATAAGAAAA GCACCGTGTT CACAGGGCGA GAAGCACTCC TCTCCCGGTT ATCCTGGCAA
ACACCTTCTG GCTGGCCCGC ACTGAAAACA GTCGATATCA GCACAACAAC ACCGGTAGAT
CTTTACGATC CGTTTGATGG AAAAAAAACA GAGAAATACT GGCAATGGGA CTTCCGCCAC
TCTACCCCTT CCATACAACA ACAGAAAGGA ACGCTTCGCT TATCAGGTGT AGCAACAAAA
GAAAATCCAG CCGGTATCGT ACTGACAGTA AGACCAACTG CCGATAACTT TGAAATGTCC
ACCAGCGTAA CGAATCACAA CAAAGCCCTC AAGGGACTGG TCATCTATGG GGACGCAAAC
GCCGCCATTG GTATCGGTGT AGAAGGAGAC AGTGTAAAAG TCTGGAAAAC TGAAAACAAA
CAACGTATCA CCATAAAGGC AGCCGCTGTG CCGTCCTCCG CTATCGGACT GAAAATAGCC
ATGTCTGGCG GCAGCAACTG CGAGTTCTTT TATCAAACGG ACGACGCTAC CTGGATACCG
CTGGCTACCG GCTTAGCAAC AGGATCTTTA GCGCAATGGG ACAGAAGTCC ACGACTGGGT
CTGCAATACA GCGGCAATAA AAACGAAAAC GCGCAGTTTG CCTTCTTCAG ATTGCACAAC
AAATAA
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| Protein sequence | MYRTKKYLAL LLSFVCLSMC ATLHAQSTTG PVIAGDLADP SIIKVDSVYY ATGTSSEWAP
YYPVYKSSNL KDWRQTGYVF DKAPDWTVGS FWAPEYYQIG DTYYMYYTAR RKSDNQSFIG
VATSRYPDHG FIDHGVIIEH GKEAIDAFIY DDNGQRYITF KAYGLENRPI EILGYKLSAD
GLKTEGEAFT LLKDDNRAGM EGQSILKKDN YYYLFYSAGN CCGGGCTYSV NVARSTSFKG
PYEYFTGNPV LSENDSWKCM GHGTFVTADD NQTYYLHHAY NKKSTVFTGR EALLSRLSWQ
TPSGWPALKT VDISTTTPVD LYDPFDGKKT EKYWQWDFRH STPSIQQQKG TLRLSGVATK
ENPAGIVLTV RPTADNFEMS TSVTNHNKAL KGLVIYGDAN AAIGIGVEGD SVKVWKTENK
QRITIKAAAV PSSAIGLKIA MSGGSNCEFF YQTDDATWIP LATGLATGSL AQWDRSPRLG
LQYSGNKNEN AQFAFFRLHN K
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