Gene Cpin_6036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6036 
Symbol 
ID8362218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7635387 
End bp7636601 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID644968170 
Productputative esterase 
Protein accessionYP_003125649 
Protein GI256424996 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000538936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.87316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAC TATTCCTCCT CGTCCTCCTG CTACCATTAA TAGCATCCGC CCAAACGCCT 
AAGCAGCTGG TTTCTTTCGG ACAACCCGAC AGCATTTACT CTGACATTCT CAAAGAAAAA
AGGGAGCTTT GGATCTATAG CCCCAATAGT GACACCAGTT TCTTTGCAAA AGCAGCCTAC
CCGGTACTAT ATGTATTGGA TGGGGACGCT CATTTCTCCT ACCTCCAGAC CATAATCCGG
CAAATGAGCG AGAACGGCGT TACTGCCCTC CCGCAAATGA TCATCGTTGG CATCGCCAGT
ACAAACGGTA ATCGTATGCA CGACCTTACT CCTACTGTTG ATCCTAAAAT GCCCGGTTCT
GGTGGCGGTG AACAGTTTAC CGCCTTCATC GAAAAAGAAC TCATCCCCTA TATTGATAAT
AAATATCCTA CCGCCCCTTA CAGGGTCTAT TCCGGTCATT CCCTGGGAGG ACTGATGGTT
ATTAATACCC TCCTCCATCA TCCGTCCCTG TTTAACGCCT ATATCGCCTC AGATCCGAGC
ATTTCCTGGA ATGATAGCCG CATCCTTCAG GCCCTCGACA GTTTACTGGA ACACCAGGAC
TTCAACAACA AACGTTTCTA TCTGGCCATT GCCCATACAA TGAATGCAAG CCTTGATACC
ATTCAGGTAA AAAAAGATAA CACGATGGGC TCCATACATA CCAGCGCCAT CCTGCAACTG
GCCAGTAAAC TCAAACAACA TCCCCGCAAT CATCTCAACT GGGCCTATAA CTATTACCCC
AACGACTACC ACAATTCCAT TCCGCTGATT GCCCAGTACG ACGGTCTGCG GACAATCTTC
CGCGCTTACT GGTTTCCCAC TTACCTCTAC CCGGATAAGT CAGGAAATAC AGACTCATTA
CGCGCACTGA TTACCACACA CTACAAAACA CTCAGCAAAG AAATGGGATA CAATGTGCTT
CCATACGAAT GGGAATTCAA TAGTTTGGGC TACCACCATT TATCCATAAA GAATTACGCA
AAATCACAAA TGTTCTTTGA GCTCAACATC GCATATTTCC CGGCAAGCTA CAATACCTAT
GATAGCATGG GCGATTATTA CATGGAAAAA GGAGACTCAG CCCAGGCGGT CATTTACTGG
AAAAAATCCT TGGCGCTAAG ACACGTGCAA CGTGTACAGG AAAAAGTAGA TAAGGTTGCT
TTATCCACAA GATAA
 
Protein sequence
MRQLFLLVLL LPLIASAQTP KQLVSFGQPD SIYSDILKEK RELWIYSPNS DTSFFAKAAY 
PVLYVLDGDA HFSYLQTIIR QMSENGVTAL PQMIIVGIAS TNGNRMHDLT PTVDPKMPGS
GGGEQFTAFI EKELIPYIDN KYPTAPYRVY SGHSLGGLMV INTLLHHPSL FNAYIASDPS
ISWNDSRILQ ALDSLLEHQD FNNKRFYLAI AHTMNASLDT IQVKKDNTMG SIHTSAILQL
ASKLKQHPRN HLNWAYNYYP NDYHNSIPLI AQYDGLRTIF RAYWFPTYLY PDKSGNTDSL
RALITTHYKT LSKEMGYNVL PYEWEFNSLG YHHLSIKNYA KSQMFFELNI AYFPASYNTY
DSMGDYYMEK GDSAQAVIYW KKSLALRHVQ RVQEKVDKVA LSTR