Gene Cpin_6034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6034 
Symbol 
ID8362216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7632053 
End bp7632937 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content45% 
IMG OID644968168 
Producthypothetical protein 
Protein accessionYP_003125647 
Protein GI256424994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000528294 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.869909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA TAACTACCGG CATAGCGGCA CTGCTATGCT CCTTATTGCC CTTGACAAAG 
AGTGGCCCGA CTATGCACAT CCAACATGCT TATACTGTGG ATTCGCTGGG TGCTTGTCAG
GGAGTGTCTA ATCAGCAGGG GAAATATTTT CTGTATGGGG ATCGTGAAGT TGGCGTAATC
AGAGAGTACA GACTGCAGGG AGACAGCCTT GTTTATGCCA ACAAAGAGAT GAAGCTGACA
CTACATGATA CGGATGTCAT CAATCATCCT ACAGGTTTTG CTTATCATGA AGGGGCGCCT
TTCTTTATCG GAAACAGTAT CCGGCTGAAT AAGGAAGGCA GCCGCTGGCG TGCAGTGATT
TACTGTGTGG ATTGGGAAGG GTTACAGCGG ACGGGTACAC TGGATGGTAA TCTGATTAAT
ACAATCGAGG ATGACGCCTG TATTCAGGGT ACAAGGCCGG AATATGTGGA ATATAATAAG
AAGTGGTATA TTGCTACAGC AGATTATGGA GATAAAGGTA ATGAGGTACG GTTGTACGAT
CATGCTGCGT TAAAGAACGC AAGACGAACG TCAGATAAAG GGGTATTGTA TAAGAAATAT
ACCTGTACGG CATGGGTACA GAATGTTCAC TGGATGCCGG AGCAAGGGTG GTTGGTATTG
ATACAGAACC AGATAGAAGG ACGGAAATGG CGGTTTACAT ACGTGGATCT CGCGGAGAGC
ATTGCAATGG GTAAACAGAA AGTGGTGAAA GTAGTGGATA TTGACAATAG GGAGGATGAA
TTAGAAGGAT TTACTTTTAT GCCTGGCGCC GGTAAAGGAA GCGGGATTGC AGTAACTTCT
TCAAGGAAGG AAAATGTAAA TATCATGCAT ATCGGATGGA AATAA
 
Protein sequence
MKFITTGIAA LLCSLLPLTK SGPTMHIQHA YTVDSLGACQ GVSNQQGKYF LYGDREVGVI 
REYRLQGDSL VYANKEMKLT LHDTDVINHP TGFAYHEGAP FFIGNSIRLN KEGSRWRAVI
YCVDWEGLQR TGTLDGNLIN TIEDDACIQG TRPEYVEYNK KWYIATADYG DKGNEVRLYD
HAALKNARRT SDKGVLYKKY TCTAWVQNVH WMPEQGWLVL IQNQIEGRKW RFTYVDLAES
IAMGKQKVVK VVDIDNREDE LEGFTFMPGA GKGSGIAVTS SRKENVNIMH IGWK