Gene Cpin_5963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5963 
Symbol 
ID8362145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7572121 
End bp7572540 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID644968103 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_003125582 
Protein GI256424929 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.280053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAA AAGTAACGCA CATGTGCGTG TACGTTCTTG ATCAGGATCG TGCATATGAT 
TTTTATGTCA ATAAGTTAGG TTTTAGGGTA CACACTGATG TGCCGATGGG TAAAGATGGC
CGTTGGTTGA CTGTGACACC ACCGGAACAG CCGGAGCTGG AAATCACCCT TTTTCTTGTA
GCGGAAGGTG GTATGTTTGA CAATGAGTCT GTGGCGATGA TGCGGCAGCT GATTCAAAAG
GGTACGTTTG GTGCAGCGGT ATTTACCTGC AATGATTTGA TGGCAACGTA TGAGGAGATG
AAGGCAAAAG GAGTAGTGTT TAAGAAACCA CCTACAAAGG AGTTTTATGC TTATGAGGCG
TTGTTCTCAG ATGATTCCGG AAATTGGTTT TCGCTCTCAC AGGTGGATAC AGAAAAATAA
 
Protein sequence
MITKVTHMCV YVLDQDRAYD FYVNKLGFRV HTDVPMGKDG RWLTVTPPEQ PELEITLFLV 
AEGGMFDNES VAMMRQLIQK GTFGAAVFTC NDLMATYEEM KAKGVVFKKP PTKEFYAYEA
LFSDDSGNWF SLSQVDTEK