| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5957 |
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| Symbol | |
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| ID | 8362138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7564175 |
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| End bp | 7565626 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968096 |
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| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
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| Protein accession | YP_003125576 |
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| Protein GI | 256424923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.122928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0117202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCGTTTT ATTCGTTTAT GATCAGTAGA AAGCCTATAG ATATTCCCTG TACCTTACAG
GAACGGAAAG TGTTAGAACA GATAGCATTA GCAGCCCACG AACTGGGAGT TGCCTGCTAC
CTGATCGGCG GCTTTGTGCG GGATAAAATA CTGAACAGAC GTACCAAAGA TATGGATGTG
GTATGCGTGG GGGACGGTAT TGCCCTTGCA CATAAAGTGG CCGGATACTT TGACAATGCC
AAAGTGAGTT TCTTCAAAAC TTATGGTACT GCCCAGGTAA AATGGAACGA CCTTGAAATT
GAATTTGTTG GCGCCAGAAA AGAAAGTTAC CGCCATGAGT CCCGTAATCC TGATGTAGAA
CCAGGTACGC TCAGAGATGA CCAGTTACGC AGGGACTTTA CCATCAATGC CCTGGCTATC
AGCCTCAACG AAGCCGACTA TGGCAGCCTG GTAGACCCTT TTGGAGGTAT TGCAGACCTG
GAAGCGAAAA TTATCAGAAC ACCCCTGGAA CCGGCGCAGA CGTTTATTGA CGATCCGCTC
CGTATGATGC GTGCCATCCG TTTTGCCTCA CAGTTACAGT TTACGATCTC TGAAGAATCC
TTCAAAGGGA TTAAGGAAAA CGCGGAACGT ATCAAGATCA TCTCCCAGGA GCGTATTACA
GATGAATTCA ACAAGATTAT GTTGTCTCCT GTTCCTTCCG TAGGACTGGA TCTGCTCTAT
AAAGCCGGCA TTATGAAGAT CATACTGCCG CAGATGGTAG ACCTGGTAGG CGTGGAAACA
GTAGATGGCA AAGGCCATAA AGACAACTTT TATCATACCT TGCAGGTAGT AGATAACATC
GCCCGCAATA CCAAAGACCT CTGGCTGCGT TGGGCTGCCC TGTTACATGA CATAGGTAAA
CCGGCCACCA AACGTTTTGA ACAGGGACAC GGCTGGACAT TCCACGGACA CGATGCAGTA
GGAGGAAAGA TGGTGACCCG CATATTTACC AAAATGAAAC TACCCCTGCA TGAGGATATG
CGGCTGGTAA AGAAACTGGT AGAATTGCAC CTGCGCCCCA TCAGCGTTAC AAAAGAAAAT
ATAACCGACT CTGCTATACG CAGATTGCTC TTTGATGCAG GTGATGATAT CGAAGGACTG
ATGATGCTCT GTGAAGCGGA TATCACCTCC AAGAATAAGG CAAAAGTGAA ACGTTACCTG
GAGAATTTTG AACTGGTACG TCAACGGCTG AAAGAAGTGG AGGAAAGTGA CCGTATTCGT
AACTGGCAAC CCCCGGTAAC CGGAGAAATG ATCATGGAAA CTTTTGGGCT GTCGCCGTCA
AGAGTGGTGG GTGACCTTAA AAATGCCATT CGTGAAGCGA TCCTGGATGG GGTGATTCCC
AATAGCTACG ATGCTGCTTA TGCATTCCTG CTTGAAAAAG CCAAATCAAT GGATTTGACA
CCAGTTAAAT AA
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| Protein sequence | MPFYSFMISR KPIDIPCTLQ ERKVLEQIAL AAHELGVACY LIGGFVRDKI LNRRTKDMDV
VCVGDGIALA HKVAGYFDNA KVSFFKTYGT AQVKWNDLEI EFVGARKESY RHESRNPDVE
PGTLRDDQLR RDFTINALAI SLNEADYGSL VDPFGGIADL EAKIIRTPLE PAQTFIDDPL
RMMRAIRFAS QLQFTISEES FKGIKENAER IKIISQERIT DEFNKIMLSP VPSVGLDLLY
KAGIMKIILP QMVDLVGVET VDGKGHKDNF YHTLQVVDNI ARNTKDLWLR WAALLHDIGK
PATKRFEQGH GWTFHGHDAV GGKMVTRIFT KMKLPLHEDM RLVKKLVELH LRPISVTKEN
ITDSAIRRLL FDAGDDIEGL MMLCEADITS KNKAKVKRYL ENFELVRQRL KEVEESDRIR
NWQPPVTGEM IMETFGLSPS RVVGDLKNAI REAILDGVIP NSYDAAYAFL LEKAKSMDLT
PVK
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