| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5950 |
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| Symbol | |
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| ID | 8362131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7554174 |
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| End bp | 7554935 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644968089 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003125569 |
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| Protein GI | 256424916 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.792388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0587504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA TTAAAGCTGC GATCGTAGAC GATGAAGTCC GCAACATCCA TATTTTGCGA
AATATTCTGG AGAATTACTG TAAAGATGTT ACGGTAGCGG GAGAGGCGCA GAACATTCAT
GACGCGGCGG AAATGATTAA AAATACCCAG ATCGACGTAC TGTTTCTGGA TATTGAAATG
CCGCCCCATA ATGGTTTCCA GTTACTGGAA ATGTTCCCTG TCCTGAATTT CGAAGTCATC
TTCATTACAG CCTTTCAGGA ATATGCATTG CAGGCGATCA AATTTGCTGC ATTAGACTAT
CTGCTCAAAC CTATCAAGGT TAGTGAGGTG GAAGATGCTT TGGAAAAAGT AAAGAAGAGC
AAAAAAGGAC GCCTCAACGA ACTTGCTTCT ATCCTGAAGG ATTACGTTAA GAACAATGAT
AACGCTTTCT CCAAGATAGT CATTCCTGTG AATGATGGTT ACAACGTCAT CGATCTGAAA
GATATTATCT ATTGCGAAGC ATTTGACAGC TATACCAAAA TACAGCTGAT CAACAACGTG
TCTCACCTGA TCTCTAAATC CCTGAAGGAA TACGAAGAGA TGCTGTCTGA CAAGGGCTTC
TATCGTGTGC ACAAGTCTTT CCTTATCAAT ATTCACCATA TCGTAAAGAT CATCAAGGGT
CTCGGTACTG CCGTTGTCAT GAGCGATCAG AAAAACATTC CTATTTCTTC CCGTAAGAAA
GATGAATTCT TCGCACAGCT GAAAGGCGTC ATCAATTTAT AA
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| Protein sequence | MSNIKAAIVD DEVRNIHILR NILENYCKDV TVAGEAQNIH DAAEMIKNTQ IDVLFLDIEM
PPHNGFQLLE MFPVLNFEVI FITAFQEYAL QAIKFAALDY LLKPIKVSEV EDALEKVKKS
KKGRLNELAS ILKDYVKNND NAFSKIVIPV NDGYNVIDLK DIIYCEAFDS YTKIQLINNV
SHLISKSLKE YEEMLSDKGF YRVHKSFLIN IHHIVKIIKG LGTAVVMSDQ KNIPISSRKK
DEFFAQLKGV INL
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