Gene Cpin_5944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5944 
Symbol 
ID8362125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7548362 
End bp7548670 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID644968083 
ProductRhodanese domain protein 
Protein accessionYP_003125563 
Protein GI256424910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0969772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA TAAGCGCAGC AGACGTGAAA CAGCGCATTG ACAGCGGCGA AACCCTGAAC 
CTTGTAGATG TAAGGGAACC GCATGAACAT GAGGATTTCA ATATCGGCGG TAAGCTGGTG
CCATTAGGCG AGATCCGTGC AATGCAGGTA GATGAACTGG AAGATCTGAA AGACCAGGAA
GTAATTGTTT ACTGCCGTAG CGGTGGTCGT AGCGGACAGG CAGCAATGAT CCTGGAAACA
ATGGGTTTCC AGAATGTAAA GAACCTGACC GGCGGTATGC TGGCCTGGCA GGACCAGTTC
GGTAAATAA
 
Protein sequence
MENISAADVK QRIDSGETLN LVDVREPHEH EDFNIGGKLV PLGEIRAMQV DELEDLKDQE 
VIVYCRSGGR SGQAAMILET MGFQNVKNLT GGMLAWQDQF GK