| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5935 |
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| Symbol | |
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| ID | 8362116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7535805 |
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| End bp | 7539098 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968074 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125554 |
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| Protein GI | 256424901 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.545401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTTA GAAGACTACT ATTTACATTC ATTGTTCTGT TTAGCACAAT CACTTCGTTT
GCGCAGGTAA CTACCAGTAG CATGATTGGT AGAATCACCG GCCCTTCGAA GGAGGCGTTA
CCCGGGGCTA CCGTTGTTGT GATCCATCAG CCTTCAGGTA CCAAGTACGG AACAACTACC
GATGCGGAAG GTTACTACCG TATCCCCAAC ATGAACGTTG GTGGTCCTTA CAAAGTAACT
TCTACCTTTA TCGGTTACAC TGAATACAAT CAGGGCGATA TCTTCCTCGC ACTCGGTCAG
CCATTCAGAC TGAACATCAG CCTTGGCGAA AAAGCCCAGG ATATCAAAGA AGTACAGGTA
ATTGGTCAAA GAAGCACTGT CTTCAATTCT AACCGTAAGG GAGCACAGAC TACCCTGAAC
CGCACACAGG TTGAAGCCCT GCCTTCAGTA GGTAGAAACC TCACTGACTT TGTACGTTTA
ACGCCTCAGG CGAAACTGAC CAAAGACGGT AGCGGTAACC AGACTATATC TATCGCAGGT
ACCAGCAACA AGTACAACGC TACTTTCGTT GATGGTGCGG TACAGAACGA TGTATTCGGT
CTGGCAGAAA ATGGTACCAA TGGTGGTCAG ATCGGTATTT CTCCGTTCAG CATTGACATC
ATTGACCAGT TCAATATTAA CGTATCTCCG TTCGACGTTA AACAGGGTGG TTTCGCAGGT
GGCGCCATCA ACGCTGTAAC CAAAAGCGGT ACTAATGAAA TAGAAGGTTC TGCATATTAC
TTCGTACGTA ACGAAAGCCT CGCTGGTAAG ACTCCAACAA AAGACGAAAG CAAACGTACC
AAACTGGCAG ATTTCTCTTC CAAAACATAC GGCGTACGTT TAGGTGGTCC GATCATCAAG
AATAAACTGT TCTACTTCGT CAACGCAGAA TGGCAGAAAG AAAACCGTCC GCAGCCATTC
GCTTATGAAA CATATGCGAA TGGTCGTGCT ACTCCGGCTT CAAGGGGTAA GCTGGATACA
CTACAAACTA AATTGCGCTC AGCAGGTTAC GATCCGGGCG GATATGAGAC AACTGAAAAT
ACACTGGATG GCCGCAAGTT CTTTGCAAGA ATTGACTGGA ACATCAACGA AAATAACAAG
TTCACTATCC GTCACCAGTA TACACATGGT GAGAGCGTAA GTCCTGGTAA ATCCAGCGCT
TCTACTATCA CCTTCTCTAA TAAAGGTATC TCCTTCCCTT CTACCACCAA CGCTACCACT
GCTGAGCTGA AAAGCCAGTT TGGTAACAGG GCGTCTAACT CCCTGCTGTT AGGTGCTAAC
TTCGTAAGAG ACGACCGCGG TATCACCGGC GCTCCATATA CTTCCGTATT CATTTCAAGA
GAATCTATCA GCTTCGGTAC AGAAGAGTTT TCTGCAGCTA ACCTGCTGAA ACAGGACGTA
CTGACCCTGA CTGATAACCT GGAACTGTAC AGAGGTAAAC ACACCATCTC CCTGGGGACA
AGTAACGAGT TCTATAACAT GACCAACGTA TTTATCGGTC AGAACTTTGG TTCTTATACT
TTCGCTACCC TGGATGATTT CCTCAATGAC AAATCACCAA CCCAGTACAA CCGTTCCTTC
TCAGCTGTAG ATAAAACTAC CGGTGATAAC ACCAACGGTG CTGCTAAATT CAAAGCACTG
CAACTGGGTC TGTATGCACA GGACGACTAC CAGGTAAACG ATCGTTTACG TTTATCACTG
GGTGTTCGTG CTGACCTGCC GATGCTGCTG ACTGATCCTG CTGTAAACAA TGATTTCAAT
ACCAATGTAC TGCCTCAGGT AGTTGCTGCC GGTAAATGGG ATATCAAAGG TGCACAGACA
GGTGTTAAGC CAGACGCTAA GCTTCTGCTG TCTCCACGCT TTGCCTTTAA CTGGGACGTG
AAAGGTGACC AGACTACCCA GATCCGTGGT GGCGCCGGTA TCTTCACCAG CCGCATCCCT
TATGTTTGGT TAGGTGGTAT CTATAACAAC AATGGTGTTA CCCTGGGTGG TATGAGACTC
GCTTACGATT CTACCAAACC AACCGGCGGT ACCAACAACC CGATTCCTTT TGTATCTGAT
CCTTATGCGC AGCCTAGCAT CACTGCTGCG CCATCAGGTA AAATTGATCT GTTTGCAAAA
GATTTCAAAT TCCCTCAGGT ATTCAGAACC AGCATCGCTG TTGATCAGAA ATTGCCTTGG
GGTATGGTGG GTAGCTTAGA AGCGATCTAC ACCAAAAACA TCAACAACGT TGTTTATTAC
AACCTGTCTT ACATCCCTGC TGGTACGAAT GTAACCGGTA GCGGTAGCGA CAACCGTCCG
ATGTGGAAAA ACGTAGGTAA ACCAATTCTG GGTAACTACA CTGATATCAT GTATGCTGAT
AATACCAGCA AAGGTTATTC TTACAACCTG ACTGCTCAGT TACAAAAAAC CTTCTATGGT
GGTTTCAGCG CAATGGCCGC TTACACTTAC GGTCGTTCTA AAAGCATCAA CGACGGTCAG
TCTTCTCAAA ACTCTTCTCA GTGGAGAGTA CCAAACGTGA GAGGTCGTAA CGACATCGAT
CTGGGTACGT CTATCTTCGA CCTGGGTTCA AGAATCATTG CTTCTGTAAC TTACAAGAAA
GAATACCTGA AACACTTCGG TACGACTGTT ACCCTGTACT ACACTGGTCA GTCCGGCGAA
AGATTCTCTT ACGGTTACAG AGATATTCCT AACACCAACA TCGTTGGCGA CTACAACGGT
TCCAGCAGTG ATAAAGGTCT GAACCTGATC TACATCCCGA GAAGTGCATC AGAGATCAAC
CTCGTATCCT ACCAGGCTAA CGGTGCAACC GTTACTCCGG AACAACAGTG GGCTGCACTG
GATGCGTTCA TCAATGGTGA TAAATACCTG AGCAAACACA GAGGTGAATA TGCACCGAAG
AATGGTCTGA GAACTCCGTT CACACACATC TTTGACCTGC ACATCGCACA GGATATCTAC
ATCACCCAGA AAAATGGTAA ACGTCATACA TTACAGATCT CCTTCGACGT ATTCAACCTG
GGTAATATGA TCAATAACGA CTGGGGTCGC GTATACTCTA CCCGTACAGG TATGAGCTAC
AACAACTACG GTCTGATCGA CTTCGTTGGT TTTGCAGCTA ACGGAACTAC TCCGACGTAT
AATTTTAAAG CGCCTACCAA ATACGACAAC AAGACTGTTG CTCAGATCGA TGATTTCGGT
TTACAGTCTG CTCGTTGGCA GGGTCAGCTG GGCTTCCGCT ATATCTTCAG ATAA
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| Protein sequence | MGFRRLLFTF IVLFSTITSF AQVTTSSMIG RITGPSKEAL PGATVVVIHQ PSGTKYGTTT
DAEGYYRIPN MNVGGPYKVT STFIGYTEYN QGDIFLALGQ PFRLNISLGE KAQDIKEVQV
IGQRSTVFNS NRKGAQTTLN RTQVEALPSV GRNLTDFVRL TPQAKLTKDG SGNQTISIAG
TSNKYNATFV DGAVQNDVFG LAENGTNGGQ IGISPFSIDI IDQFNINVSP FDVKQGGFAG
GAINAVTKSG TNEIEGSAYY FVRNESLAGK TPTKDESKRT KLADFSSKTY GVRLGGPIIK
NKLFYFVNAE WQKENRPQPF AYETYANGRA TPASRGKLDT LQTKLRSAGY DPGGYETTEN
TLDGRKFFAR IDWNINENNK FTIRHQYTHG ESVSPGKSSA STITFSNKGI SFPSTTNATT
AELKSQFGNR ASNSLLLGAN FVRDDRGITG APYTSVFISR ESISFGTEEF SAANLLKQDV
LTLTDNLELY RGKHTISLGT SNEFYNMTNV FIGQNFGSYT FATLDDFLND KSPTQYNRSF
SAVDKTTGDN TNGAAKFKAL QLGLYAQDDY QVNDRLRLSL GVRADLPMLL TDPAVNNDFN
TNVLPQVVAA GKWDIKGAQT GVKPDAKLLL SPRFAFNWDV KGDQTTQIRG GAGIFTSRIP
YVWLGGIYNN NGVTLGGMRL AYDSTKPTGG TNNPIPFVSD PYAQPSITAA PSGKIDLFAK
DFKFPQVFRT SIAVDQKLPW GMVGSLEAIY TKNINNVVYY NLSYIPAGTN VTGSGSDNRP
MWKNVGKPIL GNYTDIMYAD NTSKGYSYNL TAQLQKTFYG GFSAMAAYTY GRSKSINDGQ
SSQNSSQWRV PNVRGRNDID LGTSIFDLGS RIIASVTYKK EYLKHFGTTV TLYYTGQSGE
RFSYGYRDIP NTNIVGDYNG SSSDKGLNLI YIPRSASEIN LVSYQANGAT VTPEQQWAAL
DAFINGDKYL SKHRGEYAPK NGLRTPFTHI FDLHIAQDIY ITQKNGKRHT LQISFDVFNL
GNMINNDWGR VYSTRTGMSY NNYGLIDFVG FAANGTTPTY NFKAPTKYDN KTVAQIDDFG
LQSARWQGQL GFRYIFR
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