| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5927 |
|---|
| Symbol | |
|---|
| ID | 8362108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7523220 |
|---|
| End bp | 7524920 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644968066 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_003125546 |
|---|
| Protein GI | 256424893 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.779153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.531425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGG TCTCATTATT ACTGGTTATG ACCCTCACCA GTACAGCTTA TGCTCAGCAG
CGTTCTGTAA AGAATGACGC ATATCACTAC AAGATAGAGA AAACGATTAC TGCTTCGCGT
GGAGCAGTCG TATCGGCCCA TCCCCTTGCG AGTCAGGCAG GATTGCAGAT GTTGCAACAA
GGTGGTAATG CAGTGGATGC CGCCATCGCC ACTCAGCTGG CACTGGCAGT AGTCTATCCT
GCGGCAGGTA ATCTCGGTGG CGGCGGATTT ATGGTCGCAC ACCTGAAAAA TGGGAAAAAC
GTTACGATCG ACTACAGGGA AAAAGCACCC GGCGCCGCAT CCAGAGATAT GTATATCGAC
GCCGGTGGTA ATGCCAATAC AGCCCTTAGT CAGGACGGAC ATCTGGCTGC CGGCGTACCC
GGCACAGTAG CAGGTCTGTT TGCTTCTCTC CCCTATGCAA AACTGACGAT ACAGCAACTC
ATTGCACCAG CTATCTTATT AGCTGAAAAA GGATATGCTA TCACAGACAG AGAAGCAAAA
TCACTGAACA GGACACAGGA TAATTTCAAG AAATTAAATA CACAGGGGAA TGCCTTCATA
AAAGCTACCC CATGGAAAGC AGGCGATACA CTGCTGCAGA AAGATCTCGC AGCGACACTG
AAAAGAATCA GAGACAATGG TAAAGCAGGC TTTTATGAAG GTGAAACAGC CCGGCTGATC
GTAGCAGAGA TGCAACGCGG GCACGGTCTG ATGACAGCTG CTGATCTGAA GGCATATGAA
GCAAAAGAAA GAACAGCCGT TACTTTCGCC TATAAAAAAT ACGATATCGT TACCATGCCA
TTACCCTCCA GCGGTGGCGT AGCTTTACAG CAGATGATGG GTATGGTGGA AAAATACCCG
CTGCATGACT GGGGCTTCCA CTCCATTGCA GCCATGCACG TGATGATCGA AGCAGAACGT
CGTGCATACG CGGATCGTGC GAAGTTCCTC GGTGATCCTG ATTTCGTAAA AGTCCCGGTA
AAACAGCTCA CGGATCCGGC TTATCTGCAA ACGCGTATGC AGGACTTCGA TCCGAAAAAA
GCCAGTGTCA GCACCAATGT ACCTGCCGGT AACATCTACG AAAGTAAAGA AACTACCCAC
CTCTCCGTAA TGGACAACGA GGGGAATGCC GTTGCGGTTA CCACCACCCT GAATGGTGGC
TATGGCTCCA AAGTAGTAGT AGGTGGTGCA GGCTTTTTCC TGAACAATGA AATGGATGAC
TTCAGTGTAA AACCTGGTGT ACCTAATATG TACGGACTGA TCGGCGCAGA GGCAAATGCA
GTTGCACCGG GCAAACGTAT GCTCAGTTCC ATGACACCCA CCATCGTGCT GAAACAGGGG
AAACCCTATA TTGTAACAGG TACGCCGGGC GGCTCTACTA TTATCACCTC TGTCTTCCAG
ACGCTGCTGA ACCTGCTGGA GTTTAATCTC TCTGCACAAC AGGCTGTAGA TGCACCGAAA
TTCCACCACC AATGGCTGCC GGATGAAGTA TATGTAGAAG AAGACTTTGA TCAGACGCCC
CTGAATGGCC TGAAGCAGAT GGGATATAAA ATCGAACCGA GCAGTCCTAT CGGACGCGTG
GAACTGATCC GGATCAACGG AAAAGGACAA CTGGAAGCAG TAGGCGACAA ACGAGGCGAT
GACAGCGCCG CCGGTTACTG A
|
|---|
| Protein sequence | MRKVSLLLVM TLTSTAYAQQ RSVKNDAYHY KIEKTITASR GAVVSAHPLA SQAGLQMLQQ
GGNAVDAAIA TQLALAVVYP AAGNLGGGGF MVAHLKNGKN VTIDYREKAP GAASRDMYID
AGGNANTALS QDGHLAAGVP GTVAGLFASL PYAKLTIQQL IAPAILLAEK GYAITDREAK
SLNRTQDNFK KLNTQGNAFI KATPWKAGDT LLQKDLAATL KRIRDNGKAG FYEGETARLI
VAEMQRGHGL MTAADLKAYE AKERTAVTFA YKKYDIVTMP LPSSGGVALQ QMMGMVEKYP
LHDWGFHSIA AMHVMIEAER RAYADRAKFL GDPDFVKVPV KQLTDPAYLQ TRMQDFDPKK
ASVSTNVPAG NIYESKETTH LSVMDNEGNA VAVTTTLNGG YGSKVVVGGA GFFLNNEMDD
FSVKPGVPNM YGLIGAEANA VAPGKRMLSS MTPTIVLKQG KPYIVTGTPG GSTIITSVFQ
TLLNLLEFNL SAQQAVDAPK FHHQWLPDEV YVEEDFDQTP LNGLKQMGYK IEPSSPIGRV
ELIRINGKGQ LEAVGDKRGD DSAAGY
|
|---|
| |