Gene Cpin_5923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5923 
Symbol 
ID8362104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7516198 
End bp7516752 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID644968062 
Productputative thiol-disulfide isomerase 
Protein accessionYP_003125542 
Protein GI256424889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.358379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.532581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTC CAGCTGATCT GCCACTGGAG ATAGGTGCAC CGTTGCCGAA AGCAGATCTT 
GTATTACAGG ATTGCTCAGG TAAGGAAATT ACTTTGAATA AGGCAAAAAT GAATAACGGC
TTGCTGGTGA TGTTCTCTGG CAATACCTGT CCCTATATTG AAAGAAATCA GCTGAGAACA
CAGGAGATCT GCAAGTATGC GCTCAGTAAT AATATCGGCG TGGTACTGGT CAATTCCAAT
ATTGCGGCAG CAGATGAAAA AGCAATACTG ACGGCGATGA AAACATATGC TACTGACCAG
CAGTATAACT GGTATTATGT AGCAGATAAA AAAGCGGAAT TAGCGGACGC TTTTGAGGCG
AATCATACGC CAGAGTGTTA TCTATTCAAC CAGCAGGCGA AACTCGTTTA TAAGGGCGCT
ATTGATGATA ATCCGGGTAA TGCGGAGGCA GTGAAGATGC GACATCTGCA CAATGCGATC
AATGATATGC TGGCAGGAAA GGTTGTAAAG GTAAATTCAA CAATGGCGTT GGGATGTAAT
ATCAAGCGGT TTTAA
 
Protein sequence
MRAPADLPLE IGAPLPKADL VLQDCSGKEI TLNKAKMNNG LLVMFSGNTC PYIERNQLRT 
QEICKYALSN NIGVVLVNSN IAAADEKAIL TAMKTYATDQ QYNWYYVADK KAELADAFEA
NHTPECYLFN QQAKLVYKGA IDDNPGNAEA VKMRHLHNAI NDMLAGKVVK VNSTMALGCN
IKRF