Gene Cpin_5889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5889 
Symbol 
ID8362070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7481946 
End bp7482569 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content49% 
IMG OID644968028 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_003125508 
Protein GI256424855 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATCC CAAGGCTCAA TGTGATGGAA GACCGGCAGG AAATCGCTGC CTTTATGCAA 
CGCTTCAGCT TTGCCACTAT TATACACAGC ATCAACAACA TACCGGTAGC CACACACCTC
CCCTTCCACA TTTCTTTTCG TGACGATAAA TTATTCCTGA CCGCCCACTT TGCCAGGGCC
AACGACCAAT GGGAATGCCT GGAAAGGTCG CGGTCGCTGG TCATCTTTAG TGAGCCACAT
GCCTATATTT CGCCTACGAA CTACGAAAAG CTGCAGGAAG TCCCTACCTG GAACTATATC
TCTGTCCATG CCTATGGCCA GGCCCGTATC ATTGCCGACC CAGACGCCGT AATGGCCCTG
CTGGAGAGCA GCATCCATGA TTATGAGGCA TCCTACATGC AGCAATGGCA GGAATTACCA
GCCGCTTTCA AACTCAAACT CCTGAATGGC ATTGTTGCCT TTGAAATCGA AGTCGACGAC
CTACAAGCTA AACAGAAGCT CAGTCAGAAT AAAACCATGC AGGAGCAGCG TAATATCATT
GAAAATCTGT CCGCTAACAC TGATAGCACA GCCCGGATCA CCGCTGAATA CATGCGGAAG
AGGCTGGAAC AAGATATCGA CTGA
 
Protein sequence
MYIPRLNVME DRQEIAAFMQ RFSFATIIHS INNIPVATHL PFHISFRDDK LFLTAHFARA 
NDQWECLERS RSLVIFSEPH AYISPTNYEK LQEVPTWNYI SVHAYGQARI IADPDAVMAL
LESSIHDYEA SYMQQWQELP AAFKLKLLNG IVAFEIEVDD LQAKQKLSQN KTMQEQRNII
ENLSANTDST ARITAEYMRK RLEQDID