Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5887 |
Symbol | |
ID | 8362068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7480678 |
End bp | 7481457 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968026 |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | YP_003125506 |
Protein GI | 256424853 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAA AAACGATGGC CGAATACTTC GCCAATGGCG AAACCCCTGA AATCCTGTTT TGGGTGGGCT GTGCCGGCAG TTTTGATCAA CGTGCGCAGA AAATCACCAA AGCCTTTGCC ACTATCCTTG ATAAAGTCGG AATCCGTTTT GCAATACTCG GTAAGGAAGA AAGCTGCACC GGCGATCCGG CGCGCAGGGC GGGCAATGAA TTCATCTTCC AGATGATGGC CCAGAACAAT ATCGCCATAC TGAATGGTTA TGAAGTGAAA AAGATCGTTA CGGCATGTCC CCATTGCTTT AATACCCTCC GCAATGAATA CCCTGAACTG GGTGGACATT ACGAAGTCAT ACACCATGCT ACCTATCTGC AACAACTGAT TGACGAAGGG AAGATCCGGA TGCAGGAAGG CGGTACCTTC AAAGGCCGCA AGATCACTTA TCACGATTCC TGTTATCTTG GCCGTGCCAA TAACATTTAT GAAGCCCCCC GCAAGGTACT GGAAGCTCTG GACACAGAAC TGGTAGAGAT GAAACGTTGC CGTAGCAATG GCCTCTGCTG TGGCGCCGGT GGCGCACAGA TGTTCAAGGA GGAAGAAAAA GGCAGCACCC GCATCAACTT TGAACGTGGG AAAGAAGCAA TAGGAACAGG CGCGTCTGTG ATTGCTGCGA ATTGTCCTTT CTGTATGACG ATGCTGACAG ACGGTGTGAA AGAACAAGGT AAAGAAGACA GCGTACAGGT ACTGGATATC GCGGAAATGA TCGCACAACA GATGCAATAA
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Protein sequence | MQIKTMAEYF ANGETPEILF WVGCAGSFDQ RAQKITKAFA TILDKVGIRF AILGKEESCT GDPARRAGNE FIFQMMAQNN IAILNGYEVK KIVTACPHCF NTLRNEYPEL GGHYEVIHHA TYLQQLIDEG KIRMQEGGTF KGRKITYHDS CYLGRANNIY EAPRKVLEAL DTELVEMKRC RSNGLCCGAG GAQMFKEEEK GSTRINFERG KEAIGTGASV IAANCPFCMT MLTDGVKEQG KEDSVQVLDI AEMIAQQMQ
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