| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5883 |
|---|
| Symbol | |
|---|
| ID | 8362064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7476051 |
|---|
| End bp | 7476707 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968022 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_003125502 |
|---|
| Protein GI | 256424849 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGT TCGAAGATTC TTATAAGCAA AAAGGATTGC GCAGGCAGCT GGTCGATAGT
ATCCGACAAA AGGGCATTAC TGACGAAAAC GTATTAACAG CTATCAACAA CATCCCACGG
CATTTTTTCC TGGATACAGC ATTTGAAGGC ATTGCCTACG AAGACCGGGC TTTCCCCATC
GGGGAAGGGC AGACCATTTC CCAACCCTAT ACTGTGGCTT ATCAGTCCCA GTTACTGGAA
CTGAAACCCT ATGAAAAAGT ACTTGAAATA GGAACAGGCA GCGGCTACCA GGCTTGTGTG
CTGGGTGAGC TGAAAGTGAA TGTATTCACA ATTGAACGTC AGAAGAAATT ATTTGACCAG
GTAAAGCAAT TCCCGTTTAA GTCAAAATAC CCGACCCTCC GCTTCTTCTA CGGAGATGGT
TATGAAGGAC TACCTACCTA CGCCCCTTTT GATAAGGTGC TGGTAACGGC AGCCGCCCCT
CAGATACCTG AAAAACTACT GCAACAGATG AAAGTTGGTG GAAAAATGGT CATCCCGGTG
GGTGGTCAGG AAGTACAGCG TATGCTGCGT ATCACCAAGG TCAGTGAAAC GGACTACGAT
CAGGAAATGT TTGATAACTT TTCCTTTGTT CCTATGCTGG CAGGTAAGAC ATTATAA
|
|---|
| Protein sequence | MRRFEDSYKQ KGLRRQLVDS IRQKGITDEN VLTAINNIPR HFFLDTAFEG IAYEDRAFPI
GEGQTISQPY TVAYQSQLLE LKPYEKVLEI GTGSGYQACV LGELKVNVFT IERQKKLFDQ
VKQFPFKSKY PTLRFFYGDG YEGLPTYAPF DKVLVTAAAP QIPEKLLQQM KVGGKMVIPV
GGQEVQRMLR ITKVSETDYD QEMFDNFSFV PMLAGKTL
|
|---|
| |