Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5881 |
Symbol | |
ID | 8362062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7472921 |
End bp | 7473481 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644968020 |
Product | hypothetical protein |
Protein accession | YP_003125500 |
Protein GI | 256424847 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.717536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.487287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGTGT ACTTCATTCC GCTCTTAACC GCGCTAGCAG GCTGGTTTAC AAACAAAATA ACCATCTCTC TGCTGTTGAA TATTTTTTCA AAAAAGCAAC AACAATTTGC TGATCAGGTA GCAGATTTTG TCTCAAAACA ACTTTTTTCC TTCGACGATA TTCGTCGTCA ATTAGCCGAA CCAGAGAAAA TAAAAAGTAT GATTCCGGTA GTTGAAGTAC ATATGGATAC TTTTCTGCGG GAAAAATTAC CGGAGGCAAT GCCTGTATTT AAAATGTTCA TCGGAGACAG CACCATCCAG CAAGTAAAGA AGGTGTTGGT CGCAGAACTG GATAACATGT TTCCTGAAAT TATAGATCAG TATCTGCAGC ATACCGCAAA AGAACTGGAT GTACGACAGC TGATCAGCAG GAAAATAATG GGTATCTCCG GCGAACAGTT AAAAGAACAG ATCAAAGGTT CGCTCAGGAA AGAACTGCGG ATGGCTGAAC TGGCAGGCGC GCTTTTCGGT CTTGTAATCG GATTATTACA GTTAATGATT GCCCTACACC ACACTAACTG A
|
Protein sequence | MSVYFIPLLT ALAGWFTNKI TISLLLNIFS KKQQQFADQV ADFVSKQLFS FDDIRRQLAE PEKIKSMIPV VEVHMDTFLR EKLPEAMPVF KMFIGDSTIQ QVKKVLVAEL DNMFPEIIDQ YLQHTAKELD VRQLISRKIM GISGEQLKEQ IKGSLRKELR MAELAGALFG LVIGLLQLMI ALHHTN
|
| |