Gene Cpin_5859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5859 
Symbol 
ID8362039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7441440 
End bp7441901 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID644967997 
ProductNUDIX hydrolase 
Protein accessionYP_003125478 
Protein GI256424825 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.315919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.709567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC AAAGCGCAGG TATCTTATTA TATCGCCGGC AGGCTAAAAG GTTGGAAGTC 
TTTCTGGGGC ATCCCGGCGG ACCATTCTGG GCCAAAAAGG ATCAGGGTAG CTGGTCTGTG
CCCAAAGGAG AGTACCTGGA GGGGGAGGAG CCCTTACAAG CAGCCATCAG GGAGTTTGAG
GAAGAGACCG GTTACCGTCC CGACGGCGAT TTTATCCAGC TTACCACTAT CCGTCAGAAA
GGGCATAAAA CGGTGCATTG CTGGGCTGTT GAAGGTGATC TCGACCCTGA TAAGCTGGTC
AGCAATGACT TTGAAATGGA ATGGCCACCC CGTTCCGGTA AAATGAAATC GTTTCCTGAA
ATAGACCGGG GCGCCTGGTT TTCTGTTGAG ATGGCCCGGA AAAAGATCCT GGAAAGACAA
GCCGCTTTTA TAGATGAGCT GGTACAACTG ATTGATGAAT AG
 
Protein sequence
MAKQSAGILL YRRQAKRLEV FLGHPGGPFW AKKDQGSWSV PKGEYLEGEE PLQAAIREFE 
EETGYRPDGD FIQLTTIRQK GHKTVHCWAV EGDLDPDKLV SNDFEMEWPP RSGKMKSFPE
IDRGAWFSVE MARKKILERQ AAFIDELVQL IDE