Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5841 |
Symbol | |
ID | 8362021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7421807 |
End bp | 7423570 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967980 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_003125461 |
Protein GI | 256424808 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGCT TTTTTAAAAT TTTCTTTGCC ACCCTTCTGG CCTTCGTCGT GATCCTCATT TTAGGGGTGA TCCTGCTGGC GGGGGTGATC GGCAGCGCTA TCAGCCCCGA AGTTGTTACC CTGTCGCCTA ACAGCGTACT GGTCCTGGAA ACCAGTCAGC AATACAACGA ACAAAAAGTT TCAAATCCCG TAAATGCCCT CCTGCGTCAG GAACCGAAAT CAGTACCTGG CCTGAACGAC ATGATTCGTC TGATCAAACA TGCGGAAACT GACGACGACA TAAAAGGTAT CTATCTGAAA GCGGAAGGTA ACGCTAACGG ATTTGCTACC AACGAAGAAG TCCGCAATGC ATTGCTGCGC TTTAAACAGT CCGGCAAGTT TGTTTTTGCC TACGGCGAGG TAATGGACCA GAAGAGCTAT TATATGGCTT CCCTCGCTGA CCGGGTATAT GTGCATCCTA AAGGCGGCGT GGAATTCAGC GGTTTCTTTA CCCAGCTGAC TTTCCTGAAA GGTACCCTTG AGAAACTGGA GATTCAGCCA CAGATTTTCT ATGATGGCCG TTTTAAAAGT GCTACTGAGC CTTTACGCGA AACGGAAATG ACACTGGCGA ACCGTATTCA GACAAGCGCC TACCTGGGTG ACCTGTATGG CAATTTCCTG AAGAATATCG GTACGGCCCG TAAAATAGAT ACTGCTTCCC TGCATCGTTA TGCTAATGAA GGACTGATCC AGGAGGCGGC AGACGCATTG AAATATAAAC TGGTAGACGG TTTGAAATAC AATGACCAGG TGATGGATGA AATTAAATCC AGACTGGGTC TGAAAGGATC TGACGACGTT AACTTCGTAT CTGTATCTAA ATATATGGAT GCCGTTGACC TGACAGAAAA TAAGGGCGCC GACAATAAAG TGGCCATTAT CTATGCAGAA GGTAATATAG TAGGAGGGGA CAGTGAAAAA GACGTTACTA TCAGCAGCGG TCATTTTATC AAGTTGATCC GCGAAGCAAG ACAAGATAAA GATGTAAAAG CCATCGTTTT CCGTGTGAAT TCACCAGGTG GTAGCGCCCT CGCTTCGGAA TCGATCTGGC GTGAACTGGT GCTGGCTAAA AAGAGCAAAC CTGTGGTAGT GTCCATGGGG GACTATGCAG CTTCCGGAGG CTATTATATC TCCTGTATGG CGGATTCTAT CTTCGCACAG CCGAATACCC TGACCGGTTC TATCGGCGTA TTTGCCGTAT TGCCTAACCT GCAGGGATTC TTTAAGAATA AGCTGGGTGT GACTTTCGAC GGGGTGAAGA CCGCACAATA CGCTGATCTG GGCAATACTT CCCGTCCGCT GACTGACATC GAGAAGAAAT TCATCCAGAA CTCTGTGGAC AGCATTTATA GCACCTTCAA AAGCCGCGTG GTAGAAGGCC GTAAACTGAG CGGTGCTGTG GTAGATAGTA TCGCACAAGG TCGTGTATGG AGTGGTATCC AGGCAAAACA ACTGGGACTG GTAGACCGTA TCGGTGGTAT CAATGAAGCA ATTGCCTGTG CCGCTAAACT GGCGAAGGTA AGTTCTTACC GTCTTCGTGA ATATCCTGAA TCAGATGCTT CTTTGTCCCG TATGATGAAG AGCTTTGGCG CCAGCGCCCA TGTGGAAGCT GCCGTTAAGA ACGAACTGGG TGAGCAGTAC GACCTGTACC GCCAGATCAA GGAGATGAAG GAAATGAGCG GTGAGATCCA GGCGAAACTG CCTTATGCGG TAGATATCCG ATAA
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Protein sequence | MRSFFKIFFA TLLAFVVILI LGVILLAGVI GSAISPEVVT LSPNSVLVLE TSQQYNEQKV SNPVNALLRQ EPKSVPGLND MIRLIKHAET DDDIKGIYLK AEGNANGFAT NEEVRNALLR FKQSGKFVFA YGEVMDQKSY YMASLADRVY VHPKGGVEFS GFFTQLTFLK GTLEKLEIQP QIFYDGRFKS ATEPLRETEM TLANRIQTSA YLGDLYGNFL KNIGTARKID TASLHRYANE GLIQEAADAL KYKLVDGLKY NDQVMDEIKS RLGLKGSDDV NFVSVSKYMD AVDLTENKGA DNKVAIIYAE GNIVGGDSEK DVTISSGHFI KLIREARQDK DVKAIVFRVN SPGGSALASE SIWRELVLAK KSKPVVVSMG DYAASGGYYI SCMADSIFAQ PNTLTGSIGV FAVLPNLQGF FKNKLGVTFD GVKTAQYADL GNTSRPLTDI EKKFIQNSVD SIYSTFKSRV VEGRKLSGAV VDSIAQGRVW SGIQAKQLGL VDRIGGINEA IACAAKLAKV SSYRLREYPE SDASLSRMMK SFGASAHVEA AVKNELGEQY DLYRQIKEMK EMSGEIQAKL PYAVDIR
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