| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5809 |
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| Symbol | |
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| ID | 8361989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7381006 |
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| End bp | 7382043 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967948 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003125429 |
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| Protein GI | 256424776 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0243889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAAAGA TCGACAATAT TGTGCTGCCT GATTTCCCCC TTCTTTTGGC GCCTATGGAA
GACGTGAGTG ATCCGCCTTT CCGGGTAGTA TGTCGTGAGA ACGGGGCGGA CCTGTTATAT
ACCGAATTCA TTTCCAGTGA AGGACTGGTG AAGGATACGG AGAAATGTCG CCGTAAACTG
GCAATTTTCG ATGAAGAACG TCCTGCCGGA GTACAGATCT TCGGAGGTGA TGAAGGTAAA
CTGTCGATGG CTGCCCGCAT TGTCGATATG ACCCAGCCCG ATCTGCTGGA TATCAATTTT
GGTTGCCCGA TCAAGGGGAT CGTCAGTAAA GGCGCAGGCT CAGGGGTACT GAAAGACATT
GATCTGATGG TCCGGCTTAC AGCAGCCTGC GTAAAGTCCA CAAAACTGCC CGTTACGGTC
AAAACCCGTC TTGGCTGGGA CGAGGATACC CAAAACATCG AAGAGGTCGC AGAAAGGCTC
CAGGACGTCG GTATTAAGGC ACTGGCTATC CATGGTCGTA CCCGTACCCA GATGTACAAG
GGAGAAGCCA GCTGGGAGCT GATCGCTAAA GTAAAGAACA ACCCACGTAT ACATATTCCC
ATCTTCGGGA ACGGAGATAT TGATAGTCCG CAGAAAGCCC TGGAATATAA AAACCGCTAC
GGCGTAGACG GTATCATGAT CGGCAGGGCC GCTATCGGTT ATCCCTGGAT CTTCCGTGAA
GTAAAACACT ATCTGCAGAC GGGGGAGATG CTACCTGCTC CGACACTGGA AGACCGTATC
GCCGTTTGTA AACGTCAGCT GGAAAAATCT GTGCAATGGC GTGGCGAAGG TCATGGCATT
TTCGCCATGC GCAAACATTA CTTCAATTAC CTGAAAGGGT TACCTGATTT CAAAGCATTC
AGAAGCCGAC TGGTCACCCC GGAAGCATCT GCAGAGATCA TGGATGTACT GGATGAAATC
GCGCAGGTGT ATGCCGGTTT TGAATTTGAC CGTAAGCCTA TTCAGCTGGT CAATTATCAT
GAGAACTGTG CATTGTAA
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| Protein sequence | MVKIDNIVLP DFPLLLAPME DVSDPPFRVV CRENGADLLY TEFISSEGLV KDTEKCRRKL
AIFDEERPAG VQIFGGDEGK LSMAARIVDM TQPDLLDINF GCPIKGIVSK GAGSGVLKDI
DLMVRLTAAC VKSTKLPVTV KTRLGWDEDT QNIEEVAERL QDVGIKALAI HGRTRTQMYK
GEASWELIAK VKNNPRIHIP IFGNGDIDSP QKALEYKNRY GVDGIMIGRA AIGYPWIFRE
VKHYLQTGEM LPAPTLEDRI AVCKRQLEKS VQWRGEGHGI FAMRKHYFNY LKGLPDFKAF
RSRLVTPEAS AEIMDVLDEI AQVYAGFEFD RKPIQLVNYH ENCAL
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