Gene Cpin_5797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5797 
Symbol 
ID8361977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7364544 
End bp7365311 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content45% 
IMG OID644967937 
ProducttRNA(His)-5'-guanylyltransferase 
Protein accessionYP_003125418 
Protein GI256424765 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG ATGAACTGGA CAGCAAAATG CGGATCTATG AAACCGCGCA TGACAAGATC 
GTACTACCGG GTATGTACAT GGTAGCCCGT ATCGACGGCA GAGGATTCAC CAAACTAACA
AAGGAAACGC ATCCTTTTGA AGCCCCTTTT GATCCGCGAT TCAGAGACTA TATGGTGGAA
ACTGTAAAAC ACCTCATGAA CTGCGGCTTT AACGTCGTGT ATGGCTATAC GGAAAGCGAT
GAAATATCCT TGCTTTTCCA CCTGGCAGAA GGTGCTTTCG GTCGTAAACA CCGTAAGTAC
AACTCCATTC TCGCGGGCGA AACAAGCGCG AAATTCTCCC TGCAACTGGG TAGTCTGGCA
GCATTTGATT GCCGCATCTG CGAATTGCCT AACCGGCAAC TCGTGGTAGA TTATTTCAGA
TGGAGGAATG AAGATGCACA TCGTAATGCC CTCAATGCAC ACTGTTACTG GCAATTGCGT
AGAGACAATC ACACACGTCA GAGCGCTACC AATACAATAG AAAAAATGAG TACGGCAGAT
AAAAATGAAC TGCTGTTCCG CTATAATATC AACTTTAATA ATTTGCCGGC CTGGCAAAAA
AGAGGGATCG GTATTTACTG GGCAGAGATG GAGAAAGACG GCGTCAATCC TAAAACAGGC
GAACAGGTAG TGGTGAAAAG AAGACAGTTG TATGTGAACC AGGAACTACC GGTAAAAGAC
GAGTACAACC GTTTTATACA AGAGCTGATT GAACAAAGCG AGCAATAA
 
Protein sequence
MKFDELDSKM RIYETAHDKI VLPGMYMVAR IDGRGFTKLT KETHPFEAPF DPRFRDYMVE 
TVKHLMNCGF NVVYGYTESD EISLLFHLAE GAFGRKHRKY NSILAGETSA KFSLQLGSLA
AFDCRICELP NRQLVVDYFR WRNEDAHRNA LNAHCYWQLR RDNHTRQSAT NTIEKMSTAD
KNELLFRYNI NFNNLPAWQK RGIGIYWAEM EKDGVNPKTG EQVVVKRRQL YVNQELPVKD
EYNRFIQELI EQSEQ