Gene Cpin_5765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5765 
Symbol 
ID8361945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7338400 
End bp7339347 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content44% 
IMG OID644967906 
ProductApbE family lipoprotein 
Protein accessionYP_003125387 
Protein GI256424734 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.734986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC ACACTGAGAA TGTGTTGACC GCATTTCGCA GATCTGTGCG ACTGATGGGC 
AATGCTTTTG AGATTACTGT GGTGGCAGAA GATGAATCAT GGGCAACCGC TAAGATAGAT
CTTGCGGTTG CAGAGATCCG GCGTATAGAA TCTTTATTAA CAACATTTAG CGATGATAGT
CAGACAAACC AGATCAATTG TCAGGCGGGT ATTGCGCCTG TACATGTGGA TCGGGAGATT
TTTGAGCTTA TCCGACGGTC AATCAGGATC TCTGGTGTGA CGGACGGCGC CTTTGATATT
ACTTATGGTT CCATAGACAA GCGCTTGTGG AATTTTGACC GCTCTATGAC CAGTTTACCA
GATGAAGCAA CCGCTAAGTC AATGGTTAGG CTGATCAACT ATCGGCATAT ACTATTGGAT
GAGGCCAACA GTACCGTCAT GCTGAAAGAA AAAGGTATGC GCATCGGCTT TGGTGGCATA
GGAAAAGGGT ATGCAGCTGA AATGGCAAAG GCATTATTAC AACGGGAAGG TATACAAAGC
GGTATTGTAA ATGCGTCGGG AGATCTTGTT ACCTGGGGCT ATCAACCGGA TGGCGCTCCC
TGGACAATTG GTATTGCGCA TCCGGACCAT GCGCATCTGC CATTTTCGTA TATGAATATA
ACAGGATTGG CTGTTGCGAC CTCTGGTAAT TACGAGAAGT TTGTCGTGAT CGGAGGTACG
AAATATTCTC ATACAATTAA TCCCAGAACC GGACTACCGG TTAAGGGAAT TAAGAGTGTA
ACTATCATTA GTCCTAATGC AGAAATCGCT GATGCCATGG CGACACCCGT AACAATTATG
GGTATTAGGG CGGGTCTGAA TATGATCAAT CAGATTCATT ATCTCGGATG TATCATCATT
GATGATGAGA ATAAAATTTA TACATCACAA AACATCAATT TAAAATGA
 
Protein sequence
MQTHTENVLT AFRRSVRLMG NAFEITVVAE DESWATAKID LAVAEIRRIE SLLTTFSDDS 
QTNQINCQAG IAPVHVDREI FELIRRSIRI SGVTDGAFDI TYGSIDKRLW NFDRSMTSLP
DEATAKSMVR LINYRHILLD EANSTVMLKE KGMRIGFGGI GKGYAAEMAK ALLQREGIQS
GIVNASGDLV TWGYQPDGAP WTIGIAHPDH AHLPFSYMNI TGLAVATSGN YEKFVVIGGT
KYSHTINPRT GLPVKGIKSV TIISPNAEIA DAMATPVTIM GIRAGLNMIN QIHYLGCIII
DDENKIYTSQ NINLK