Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5765 |
Symbol | |
ID | 8361945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7338400 |
End bp | 7339347 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967906 |
Product | ApbE family lipoprotein |
Protein accession | YP_003125387 |
Protein GI | 256424734 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.734986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACAC ACACTGAGAA TGTGTTGACC GCATTTCGCA GATCTGTGCG ACTGATGGGC AATGCTTTTG AGATTACTGT GGTGGCAGAA GATGAATCAT GGGCAACCGC TAAGATAGAT CTTGCGGTTG CAGAGATCCG GCGTATAGAA TCTTTATTAA CAACATTTAG CGATGATAGT CAGACAAACC AGATCAATTG TCAGGCGGGT ATTGCGCCTG TACATGTGGA TCGGGAGATT TTTGAGCTTA TCCGACGGTC AATCAGGATC TCTGGTGTGA CGGACGGCGC CTTTGATATT ACTTATGGTT CCATAGACAA GCGCTTGTGG AATTTTGACC GCTCTATGAC CAGTTTACCA GATGAAGCAA CCGCTAAGTC AATGGTTAGG CTGATCAACT ATCGGCATAT ACTATTGGAT GAGGCCAACA GTACCGTCAT GCTGAAAGAA AAAGGTATGC GCATCGGCTT TGGTGGCATA GGAAAAGGGT ATGCAGCTGA AATGGCAAAG GCATTATTAC AACGGGAAGG TATACAAAGC GGTATTGTAA ATGCGTCGGG AGATCTTGTT ACCTGGGGCT ATCAACCGGA TGGCGCTCCC TGGACAATTG GTATTGCGCA TCCGGACCAT GCGCATCTGC CATTTTCGTA TATGAATATA ACAGGATTGG CTGTTGCGAC CTCTGGTAAT TACGAGAAGT TTGTCGTGAT CGGAGGTACG AAATATTCTC ATACAATTAA TCCCAGAACC GGACTACCGG TTAAGGGAAT TAAGAGTGTA ACTATCATTA GTCCTAATGC AGAAATCGCT GATGCCATGG CGACACCCGT AACAATTATG GGTATTAGGG CGGGTCTGAA TATGATCAAT CAGATTCATT ATCTCGGATG TATCATCATT GATGATGAGA ATAAAATTTA TACATCACAA AACATCAATT TAAAATGA
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Protein sequence | MQTHTENVLT AFRRSVRLMG NAFEITVVAE DESWATAKID LAVAEIRRIE SLLTTFSDDS QTNQINCQAG IAPVHVDREI FELIRRSIRI SGVTDGAFDI TYGSIDKRLW NFDRSMTSLP DEATAKSMVR LINYRHILLD EANSTVMLKE KGMRIGFGGI GKGYAAEMAK ALLQREGIQS GIVNASGDLV TWGYQPDGAP WTIGIAHPDH AHLPFSYMNI TGLAVATSGN YEKFVVIGGT KYSHTINPRT GLPVKGIKSV TIISPNAEIA DAMATPVTIM GIRAGLNMIN QIHYLGCIII DDENKIYTSQ NINLK
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