Gene Cpin_5762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5762 
Symbol 
ID8361942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7335836 
End bp7336903 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content48% 
IMG OID644967903 
ProductSaccharopine dehydrogenase 
Protein accessionYP_003125384 
Protein GI256424731 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.353531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA ACAGTATATT GCTCTATGGA GCGAATGGTT ATACCGGCGA ACTCATTGCC 
AGATATGCCG CTCAATATGG TCTGCAACCT ATCCTTGCCG GCCGTAAAAA AGACGCGATC
GAAGCCCTCG CAAAAGAATT ACAATTACCT TTCCGTATCG TCGAACTGCA TGACAGCACC
GCTCTCAACG CTGCCCTTGC AGATATCGCA CTGGTCATCC AGGCTGCCGG TCCTTATCAT
ATAACCGCAC AACCGATGAT CGATGCCTGT ATCGCTACCA ATACCCATTA CATCGATCTC
AACGGAGACC TGGATGTATT TGAAATGTTG CAGGGGTATG ATCAGGCAGC AAAAAGTAAA
GATATCATGA TATTACCCGG CGCAGGGTTT GACGTAGTAC CGACCGACTG CCTCGCACTC
TATCTGAAAC AACAATTACC CGACGCCAAC GAACTGACCA TCGCATTTGC CGTAATAGGC
AGTGCGCTCT CCCGTGGTAC CTCTATCAGT ACACTACATA AACTGGGTAC ACCCGGCGCT
ATCAGAAAGG ATAACAAGAT CGTATATGAG CCCATGGGTA AAAAAGGGAT GTCTGTACGC
TTCCCGGGAT ATAAAAAACC GGTCTTCGTT ATGAGCATTC CCTGGGGAGA TATCAGCACC
GCCTGGTATT CGACCCGCAT TCCTAATATC CGCACCTTCA CCGCGATCAA TAAATCTGCC
TGGTATTTCC TGAAAGGACA AACCGTCTTT AACTGGTTAC TGAAAACATC CTTCATGCGT
AGTATCATTA TGGGGATACT GAAAATGCAG TCCGCCGGCC CCAATCAACA AACACGTGAT
AAAGCCACCA GTTATATATG GGGGAAAGTA TCCAACGCCA AAGGGGAGTC AGTAGAAGCC
AACATGGAAA CACCGGAAGC GTATTCGCTG ACCGCATTCA GCATCCTGGT CATTGCAAAG
AAGATCATCA GCGGTAATTA TAAACCTGGT TATCAGACGC CTTCCAGCGC ATACGGGCCG
GATCTGATTA TGGAGATAGA CGGGGTGAAA CGAACACTTA AACATTAA
 
Protein sequence
MQRNSILLYG ANGYTGELIA RYAAQYGLQP ILAGRKKDAI EALAKELQLP FRIVELHDST 
ALNAALADIA LVIQAAGPYH ITAQPMIDAC IATNTHYIDL NGDLDVFEML QGYDQAAKSK
DIMILPGAGF DVVPTDCLAL YLKQQLPDAN ELTIAFAVIG SALSRGTSIS TLHKLGTPGA
IRKDNKIVYE PMGKKGMSVR FPGYKKPVFV MSIPWGDIST AWYSTRIPNI RTFTAINKSA
WYFLKGQTVF NWLLKTSFMR SIIMGILKMQ SAGPNQQTRD KATSYIWGKV SNAKGESVEA
NMETPEAYSL TAFSILVIAK KIISGNYKPG YQTPSSAYGP DLIMEIDGVK RTLKH