| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5751 |
|---|
| Symbol | |
|---|
| ID | 8361931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7316036 |
|---|
| End bp | 7316812 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967892 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125373 |
|---|
| Protein GI | 256424720 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.56742 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATTA CCCATATTGA CACCGCCTGT ATCCTGCTTG AAATAGGGGA CTTCAAAATA
TTGACTGAAC CTACGCTGGA CAACGCCGGC GCATTATACT ACCATGGTTT TGGCGCGTTC
TCCCGTAAAA CCGAAGATCC GGCCCTGCCC TTATCAGCCT TACAGGATAT TGACCTGGTA
TTGCTCAGTC ATGATCAGCA TAAGGATAAC CTGGATAATA ATGGTCGCGC ATTCATCAAT
AGCTTTCCCC ATGTGCTTTC TACTACCGCT GCTGCCAGAC GTTTAAAAAA CGTAAGAGGG
CTGCAAAAGT GGGAGAGTTA TGCGATAGAT ACGCCGAAAG TTCCTGGCCT GCGGATCACG
GCTACACCTG CCCAGCATCG GCCGGCATGG ATACCGGAGT TTATATCCGG TATGGTGACG
GGATTTGTGA TTGAATATGA GGGGCAGCCC GATGGCGTGA TCTATTTGTC CGGCGATACG
GTATATTTCA ATGGCATTGC GGAAGTCGGC AAACGGTTTA AAGTAGGTAC CGGTATCTTT
AACCTGGGGG CGGTACAGTT CAGGTATCTT TCCGGCTTCG GGCAATATAC CATGGATAGC
AGGGGATTGA TCCGGGCCGC AAAAGTATTA CAACCCAATA AGATTATCCC GGTACATCAT
AGTGGCTGGA CGCATTTCAA GGAGCAGACA GCGGCGTTGC AAAAGGTACT GCAAGGCCAT
CAACTGACCC GGGAGCGTAC AATATTTTTG TCACGGGGAG AACGAACGTT GATTTGA
|
|---|
| Protein sequence | MYITHIDTAC ILLEIGDFKI LTEPTLDNAG ALYYHGFGAF SRKTEDPALP LSALQDIDLV
LLSHDQHKDN LDNNGRAFIN SFPHVLSTTA AARRLKNVRG LQKWESYAID TPKVPGLRIT
ATPAQHRPAW IPEFISGMVT GFVIEYEGQP DGVIYLSGDT VYFNGIAEVG KRFKVGTGIF
NLGAVQFRYL SGFGQYTMDS RGLIRAAKVL QPNKIIPVHH SGWTHFKEQT AALQKVLQGH
QLTRERTIFL SRGERTLI
|
|---|
| |