| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5740 |
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| Symbol | |
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| ID | 8361920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7302619 |
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| End bp | 7303959 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967881 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003125362 |
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| Protein GI | 256424709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0770281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.815155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAG TTTTGCTATG GACCTTTGTC CTTTTAGGCT GTTCAACATT CGCACAACAA
AAGAAAGATT TTCATTCCTG GGCGCCTACA CCGCCAATGG GATGGAACAG CTGGGATTGT
TATGGACCAA CCGTAACAGA AGCAGAAGTA AAAGCCAATG CCGACTATAT GGCCAGCCAT
CTGAAATCAT CAGGATGGCA ATACATTATA GTAGACATCC GCTGGTATGT GGCCAATGAT
AAATCACATG GTTATAATGA AACCGATCCT GCATATAATA TCGACGCCTA CGGACGTTTC
CAGCCTGCCG TCAACCGTTT CCCTTCCGCC GCAAACGGAA AGGGATTTAA ACCACTGGCA
GACTATATAC ACAGTAAAGG ATTAAAATTC GGCATCCACA TTATGCGGGG AGTACCCGTA
GTAGCGGTTA ATAAAAAACT GCCTGTGAAA GGTACTAATG TCACTGCTGC GGATATCTAC
AGCAAACAGG ATCAATGTAA ATGGCTGCAT GATATGTATA CCATCGTGCC GGATAAAACA
GGCGCACAGG AATATTATAA CTCCCTGTTT GATATGTATG CAGCCTGGGG ACTTGACTTC
GTAAAAGTAG ATGATCTCTC CGCCCCTATT TACTTTACTG AAGAGATTGA AATGATCAGA
AAAGCGATCA CCCGGACAGG CCGTAAAATA CTGCTCAGTA CTTCTCCGGG GGAAACCCCC
ATCGCACAGG GCGCACACGT ACAGCAACAT GCAAATATGT GGCGTACTGT CGATGATTTC
TGGGATAACT GGCCCCACCT GAAAGACCAT TTCGAAGTAT TTGATCGCTG GAATAAATGG
CGTACTACCG GCGCATGGCC TGACGGAGAC ATGTTGCCAC TCGGACATAT CGGCATCCGT
GCAGAAAGAG GACAACCACG GATGACCTCC TTTACAAAAG ATGAACAATA CACCTTAATG
ACACTCTGGA CGATCTTCAG ATCGCCATTA ATGTTTGGAG GTAACCTGCC CGACAATGAT
CCTTTTACCC TGTCACTACT GACCAACAAA CAGGTATTAC AGGTACTGAA TAACAGCAGT
AATAACCGGC CGGTTTTTAA TGATAAAGAC AAAGCTGCCT GGACGGCGGA TATGCCTGGG
AAATCAGCAA AATACCTGGC AGTTTTTAAT AAAGCAGATA AGGATGCTGC AGCTGTGAAT
GTGGATCTCT CTGAGATAGG AATCAAGGGT AGCTGTACCA TCACTGACCT GTGGACAGGA
AAAGTGCTGG GAAAATTCAC GGGTAGTTTT GCTCCGCAGA TCAATCCGCA TGGTGCAGGA
TTATATAAAG TCACACCCTG A
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| Protein sequence | MKSVLLWTFV LLGCSTFAQQ KKDFHSWAPT PPMGWNSWDC YGPTVTEAEV KANADYMASH
LKSSGWQYII VDIRWYVAND KSHGYNETDP AYNIDAYGRF QPAVNRFPSA ANGKGFKPLA
DYIHSKGLKF GIHIMRGVPV VAVNKKLPVK GTNVTAADIY SKQDQCKWLH DMYTIVPDKT
GAQEYYNSLF DMYAAWGLDF VKVDDLSAPI YFTEEIEMIR KAITRTGRKI LLSTSPGETP
IAQGAHVQQH ANMWRTVDDF WDNWPHLKDH FEVFDRWNKW RTTGAWPDGD MLPLGHIGIR
AERGQPRMTS FTKDEQYTLM TLWTIFRSPL MFGGNLPDND PFTLSLLTNK QVLQVLNNSS
NNRPVFNDKD KAAWTADMPG KSAKYLAVFN KADKDAAAVN VDLSEIGIKG SCTITDLWTG
KVLGKFTGSF APQINPHGAG LYKVTP
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