| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5682 |
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| Symbol | |
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| ID | 8361862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7249552 |
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| End bp | 7251234 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967825 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003125306 |
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| Protein GI | 256424653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.305949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAA ATATTAATAA TACCGGTCTG CCGGATGAAG CAATTTTGGA ACAACTGGCG
AATGAACTCT TCCGTCAGAC AGAAACAGGC AACAGCCTGC ATGGCCTGCA AGCCGGAAGG
CCGCAGGACG TAATACCGTA TGTGCCTGAC GACGGACAAT CACCTGCCGG TATCTTCCAT
GGCAATAATA TTGACTTCGA AGATCCGCAA ACCAGTTTCC CGGATCAGAA TCTCCAAAGC
AATAGATCTT CTGTTCCCGG CGATAGCATC TTCGCGCCCT CCGTGCGACT AAAAGAATAT
CTGCCCTTTG AATTAGATGC CACTCATTTA TTCAATATGC AGGCAATATT GTCGCATATT
CCTGCGGAGC GTACGACCGC CTTCCAGCAT CCATTCGCTC ACACGCTCGA AGAAGCGCCA
GCCTACTATT TCCTGGATAA TAAACCGGGT GTTTTTTCAA CCTGGGGCTT TGATGCTTAC
ACCGTGAAAA AGGATTTTCC GATATTATCT GAGCAGGTCA ATGGTAAACC ACTGGTATGG
CTGGATAATG CAGCTACCAC CCAAAAACCG AAACCTGTTA TCGATCGTAT CAGCTATTTC
TACCAGCACG AAAATTCCAA TATTCACCGC GCTGCACACG ATCTCGCCGC CAGAGCCACC
GATGCCTATG AAGATGCCCG TAAAAAAGTA CAGACCTTCA TCAATGCAGG CTCTCCTAAT
GAAATTGTGT TTGTACGCGG TACTACGGAA GCCATTAACC TGGTGGCAAA AAGCTGGGGA
GAACAATATC TCAATGCCGG TGATGAAATC GTACTGACGC ATCTTGAACA CCACGCCAAC
ATTGTTCCCT GGCAACAACT AGCCGCAAAA AAGGGACTTA AACTACGTGT CGCCCCCGTA
GATGACGACG GACAAGTATT GCTGGATGAA TATGCAAAAC TGCTGAACAG CAAAACCAAA
CTCGTCGCAT TTACACAGGT ATCCAATGCG CTCGGTACTA TTACGCCTGC ACATGCCGTC
ATAGAAATGG CACACAATGT TGGTGCAAAA GTACTGTTGG ATGGCGCACA GTCCGTCTCT
CATATGCGTA CAGATGTACG TGCATTGAAT GCAGACTGGT TTGTGTTTTC AGGACACAAG
ATGTTTGGTC CCACCGGTAT AGGAGTATTG TATGGAAAAG AAGACCTGTT GAATCAGACA
GAACCCTGGC AGGGTGGTGG TAACATGATT AAAAATGTGA CCTTCGAACA TACAGAATAT
CACGCCGCTC CTGGTCGCTT CGAAGCAGGA ACCGGTAATA TTGCAGATGC TGTAGGATTA
GGCGCCGCTA TCGATTATAT CAACAAACTG GGTATCGATA ACATCGCCTT ATATGAACAC
TATCTGCTGG AATATGCCAC CCGCTTAATG AAAACAGTAC CTGGTCTTCG TCCCGTCGGT
ACGGCTAAGG AGAAAGCAAG CGTCTTGTCT TTCACACTCG AAGGCTATTC CAATGACCAG
GTAGGACAGG CATTGAATAA AGAAGGTATT GCCGTCAGAA CAGGACACCA TTGTGCACAG
CCTATATTAC GCAGGTTCGG ACTGGAAAGT ACAGTAAGAC CATCACTGGC TTTCTATAAC
ACCTGCGCAG ATGTGGATCT GCTCGTGAAT ACCTTATTAC GTTTAAAAAA TGCAAAAAGA
TAA
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| Protein sequence | MNTNINNTGL PDEAILEQLA NELFRQTETG NSLHGLQAGR PQDVIPYVPD DGQSPAGIFH
GNNIDFEDPQ TSFPDQNLQS NRSSVPGDSI FAPSVRLKEY LPFELDATHL FNMQAILSHI
PAERTTAFQH PFAHTLEEAP AYYFLDNKPG VFSTWGFDAY TVKKDFPILS EQVNGKPLVW
LDNAATTQKP KPVIDRISYF YQHENSNIHR AAHDLAARAT DAYEDARKKV QTFINAGSPN
EIVFVRGTTE AINLVAKSWG EQYLNAGDEI VLTHLEHHAN IVPWQQLAAK KGLKLRVAPV
DDDGQVLLDE YAKLLNSKTK LVAFTQVSNA LGTITPAHAV IEMAHNVGAK VLLDGAQSVS
HMRTDVRALN ADWFVFSGHK MFGPTGIGVL YGKEDLLNQT EPWQGGGNMI KNVTFEHTEY
HAAPGRFEAG TGNIADAVGL GAAIDYINKL GIDNIALYEH YLLEYATRLM KTVPGLRPVG
TAKEKASVLS FTLEGYSNDQ VGQALNKEGI AVRTGHHCAQ PILRRFGLES TVRPSLAFYN
TCADVDLLVN TLLRLKNAKR
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