Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5604 |
Symbol | |
ID | 8361781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7154289 |
End bp | 7155299 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967747 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003125231 |
Protein GI | 256424578 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.609172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CCGTTCTTGC GCCGATCAGC TGGCGCACGC CCCCAAAGCA ATATGGCCCC TGGGAACAGG TAGCCTCTGT GCTTACCGAA GGATTAGTAC ACCAGGGGCT CGATGTGACA CTTTTCGCTA CCGGCGATTC CATTACCAAT GCAAAACTGT CTTCCGTCAG AGAACACTCT CTTGGCGATG AACCTGGCGA TTTTAAAGTA TGGGAATGTC TACATATCTC CTCATTGATG GAACGTGCCG GGGAATTTGA TCTCATTCAC AGTCATTTCG ACTTTCTGCC ATTGACCTGG TCCCGGGTGA TTAAAACACC TATGCTGACC ACTATTCATG GTTTCTCCTC TCCTGCTATT CTTCCGGTAT ATCAGAAATA TAACGGTACG ACACACTACG TCTCTATCAG TAACAGTGAC CGCGATCCTT CACTGACCTA CATCGATACC GTATATAACG GACTGAATGA AACCTTGTTT TCTTTTACGG CTACGCCGGA TGACTATCTG CTGAGTTTTG GACGGATACA CCCCGAAAAA GGGACGCATC TGACCATTGA GATTGCCAGG GAAGCGGGTA TGCGTTTAAT CATCTGCGGA CTGATTCAGG ACGAAAACTA TTTCCGGGAA AAGATCGCCC CACATATCGA TAACAGGCAG GTGATCTATA AAGGGAATGT AGGTCCGGAA GACCGGAACA ATATCCTCGG AAAAGCAAAA GCATTACTGC ACCCGGTCCT GTTCAATGAA CCATTCGGGT TAAGTATTGC GGAAGCCATG ATGTGTGGTA CGCCGGTCAT CGCATTTGAC AGAGGCGCCA TGAAAGAGCT GATTACAGAC GCTAAAACAG GATTCCTTGT AAAGAATACA GCGGAAGCAG TATTGGCCGT AAAACAGGCG GATAATATTC TCAGAAACGA TTGCCGCGAA CATTCCCTGG CCAGGTTCAG CCAGGGAAAG ATGGTCTCAC ATTATATAGA AGTCTATAAA CGTATATTGG GTACTCACTG A
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Protein sequence | MKIAVLAPIS WRTPPKQYGP WEQVASVLTE GLVHQGLDVT LFATGDSITN AKLSSVREHS LGDEPGDFKV WECLHISSLM ERAGEFDLIH SHFDFLPLTW SRVIKTPMLT TIHGFSSPAI LPVYQKYNGT THYVSISNSD RDPSLTYIDT VYNGLNETLF SFTATPDDYL LSFGRIHPEK GTHLTIEIAR EAGMRLIICG LIQDENYFRE KIAPHIDNRQ VIYKGNVGPE DRNNILGKAK ALLHPVLFNE PFGLSIAEAM MCGTPVIAFD RGAMKELITD AKTGFLVKNT AEAVLAVKQA DNILRNDCRE HSLARFSQGK MVSHYIEVYK RILGTH
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