Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5499 |
Symbol | |
ID | 8361676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7013732 |
End bp | 7014307 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967645 |
Product | putative outer membrane protein |
Protein accession | YP_003125129 |
Protein GI | 256424476 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.234024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000160663 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAAGC TCACTTTTAT TGCCGCTACA ATGCTGGCTG CCTGGATGTT TCAGGCTTGT AATTCAGGAA ACACAGAAGC CAAACACGAA GATGCTGTAG ATAGTGCGCA GGCAGTAAAT AAAGAAACCG CTCCTGTAGA TAAAGAATCA TCTGACTTCG CAGTAAAAGC TGCTGACGGC GGCATGCTGG AAGTACAGGC TGGTAAACTG GCACAGGAAA AAGGTACAAC ACAGCGTATC AAGGATTTTG GTGCACTGCT GGTGCGTGAT CACTCTAAAG CGGGCGACGA ACTGAAGGGA CTGGCGACTA CTAAGAATAT TACCCTGCCA GATAGTGTAG GGTCCGACTA TTCTGAACAC CTGAGAGACA TGAGTAAACT CTCCGGTAAA GAGTTTGACA AACACTTCAT CGACATGATG GTAAATGATC ATGATAAAGA TGTAGATATG TTTGACAAAG CGTCTCAGAA CCTGACTGAT CCGGACCTGA AAACATGGGC AGGTAACACA TTGCCTACGC TGAAAGCACA CCAGGATACC GCTAAGGCGA TCCAGGATGC GATGAAGAAG AAATAG
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Protein sequence | MKKLTFIAAT MLAAWMFQAC NSGNTEAKHE DAVDSAQAVN KETAPVDKES SDFAVKAADG GMLEVQAGKL AQEKGTTQRI KDFGALLVRD HSKAGDELKG LATTKNITLP DSVGSDYSEH LRDMSKLSGK EFDKHFIDMM VNDHDKDVDM FDKASQNLTD PDLKTWAGNT LPTLKAHQDT AKAIQDAMKK K
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