Gene Cpin_5457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5457 
Symbol 
ID8361634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6968511 
End bp6968798 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content45% 
IMG OID644967603 
Productprotein of unknown function DUF721 
Protein accessionYP_003125087 
Protein GI256424434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.010243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.786712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACG GAATAACATC AATGGAGGAT GCACTGAAAG ATTTCATGTC GAAAAGTCGG 
TTAAAACCGA GGCTCACCGA AGTGCGCATA CAGGAGAACT GGGAACAGCT GATGGGAAGA
ACAATCTCCC GCTACACAGA GAATTTACAG CTGATCGATG GTAAATTACA CATTGTTACC
ACCGTTGCTC CACTGAAACA GGAACTGAGC TATTCAAAAG ATCGTATCAT CAAACTGGTG
AACGAAATGC TGGGTGAACC TGTGGTGAGA GAAGTGATCG TTCGATAA
 
Protein sequence
MRYGITSMED ALKDFMSKSR LKPRLTEVRI QENWEQLMGR TISRYTENLQ LIDGKLHIVT 
TVAPLKQELS YSKDRIIKLV NEMLGEPVVR EVIVR