| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5431 |
|---|
| Symbol | |
|---|
| ID | 8361608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 6942115 |
|---|
| End bp | 6943422 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644967577 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_003125061 |
|---|
| Protein GI | 256424408 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.418256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.890668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT TCAGTCTACA GAATAAACAA CACGTTGTAT CTTTTGAAGA AGCCGTAGTA
CAGGGTCTCG CACCCGATAA AGGATTATAC TTCCCCGAGC GTATTCCGGC TTTTGAGCAA
GCATTCCTCA ATGATATCGT TCATAAAAAC GACCTCGATA TTGCTTACGC AGCGATACAG
CCATTTGTAG GAGAAGAAAT TCCCGAAGCT ACATTAAGGC AGATCATTGC GGATACGCTT
AGTTTTCCTT TCCCGGTGGA GAAAGTAGAA GGGAATGTAT ATTCCCTGGA ACTCTTCCAT
GGTCCTACCC TGGCATTTAA GGACGTCGGC GCACGCTTTA TGGCGGGTTG CCTGGGTTAT
TTCAGAAGAA ATGATAGCCG TCCGGTAACT GTACTCGTAG CTACTTCCGG TGATACCGGC
GGTGCTGTTG CCAACGGTTT CTATAATGTG CCCGGCGTAC GTGTAGTGAT CCTTTACCCT
TCCGGCAAAG TGAGCACCTT ACAGGAAAAA CAGCTGACCA CACTCAATGG CAACATTACA
GCGCTTGAAA TAGACGGTAC TTTTGATGAT TGTCAGCGGA TGGTGAAAAC GGCTTTTCTG
GATGAAGCTT TGCAGTCACA CGTAATGCTG ACCAGCGCTA ACTCTATCAA CGTCGCACGC
TGGCTGCCGC AGATGTTCTA TTATCTGCTG GCATACAAAC AGCTTAGCGC TGCCTATCCT
GATATCGTAT TCTCTGTACC AAGCGGCAAC TTTGGTAATA TCTGTGCAGG CATGATGGCG
GCAGCGATGG GGCTTCCGGT AAAACATTTC GTGGCCAGTA CCAATGTGAA TGATACGGTG
CCAAGATTCA TGCAGACAGG CGCGTATACG CCAGGTAAAG CGACAGCTAC ACTGTCTAAT
GCGATGGACG TGGCTGATCC GAGCAACTTT GTACGTATCC TTGAATTATT TGCGAATAGT
TTGCCGGCTC TGAAAGAGAA ACTGACATCT ATTTCCTTCA ACGATAAAGA TACCGCGGCT
ACGATGGAAC AGGTCTGGAA AGACTACCAG TATATGCTGG ATCCTCATGG CGCGGTAGGC
TATCTCGGCC TGAAACAGTA TTTGCAGACG ACTGGTCCGG ATACAAAAAC TGCCGGTGTA
TTTCTGGAGA CAGCGCATCC GGTTAAATTC GCAGATACTG CTCCGGCGTC TCTGCAGGAT
AAGATCGTAA CGCCTGACAG GGTACAGTCC CTGTATGACC TGGAGAAACA ATCCATACAA
CTCCCGGCTG AGTATAATGC ATTAAAACAA TGGCTCATGG CCAATTGA
|
|---|
| Protein sequence | MKYFSLQNKQ HVVSFEEAVV QGLAPDKGLY FPERIPAFEQ AFLNDIVHKN DLDIAYAAIQ
PFVGEEIPEA TLRQIIADTL SFPFPVEKVE GNVYSLELFH GPTLAFKDVG ARFMAGCLGY
FRRNDSRPVT VLVATSGDTG GAVANGFYNV PGVRVVILYP SGKVSTLQEK QLTTLNGNIT
ALEIDGTFDD CQRMVKTAFL DEALQSHVML TSANSINVAR WLPQMFYYLL AYKQLSAAYP
DIVFSVPSGN FGNICAGMMA AAMGLPVKHF VASTNVNDTV PRFMQTGAYT PGKATATLSN
AMDVADPSNF VRILELFANS LPALKEKLTS ISFNDKDTAA TMEQVWKDYQ YMLDPHGAVG
YLGLKQYLQT TGPDTKTAGV FLETAHPVKF ADTAPASLQD KIVTPDRVQS LYDLEKQSIQ
LPAEYNALKQ WLMAN
|
|---|
| |