| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5398 |
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| Symbol | |
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| ID | 8361575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6904899 |
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| End bp | 6906314 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967545 |
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| Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
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| Protein accession | YP_003125029 |
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| Protein GI | 256424376 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.243683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.179969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAC CAATAAGTCT GAAAGAAAAA GTAGGATACG GCTTCGGCGA CATGGCTTCT
TCCATGTTCT GGAAGTTGTT TGGCATGTAC CTGCTGTTTT TCTATACAGA TGTCATGAAA
CTGGATGCAG CCGCGATCGG CACCATGTTT CTGATCACCC GTGTCTGGGA TACCCTGTTT
GATCCTTTCG TGGGTATCAT TACAGACAGG ACACAGAGCA GATGGGGAAA ATTCCGTCCT
TATCTGCTGA TGATGGCCCT GCCTTTTGCA ATTGCCGGCA CATTGACATT CTATACACCT
TCATTTGCCG GTGGCGGCAG ACTTGTCTAC GCCTATGTCA CCTACTCGCT CATGATGATG
ATCTATTCAC TGATCAATGT ACCCTATGCT TCTTTATTGG GCGTGATCAG CAATGATGGT
CGTGAACGGA ATACCCTGGC CTCCTTCAGA ATGTCTTTTG CATTCGCCGG GAGCTTCATG
GCACTGGGAT TACTGGAGCC ACTTGTGCAA TATTTTACCC CTTACGGATT AAGCGCCGCC
TGGGTATTCG CAGTAAGTAT TATCGCTGTG ATCTGCCTCT TGCTGTTCCT GCTATGTTTT
GCATGGGTGA AAGAAAGAGT ACAACCCATA CAACAACAAT CCGGCAGACT GAAAGACGAC
TTTGCCGACC TCCTGCACAA TAAACCCTGG TGGATACTAT TGGGCGCCGG TATTGCTGCA
CTGATCTTTA ATTCTATCAG GGATGGCGCG ACTGTTTATT ATTTCAAATA CTATATCACG
CAGAACCAGG CATTCAATGT AGCCGGCATT CCTTTTACTT ATTCCACACT TTATCTGCTC
ACTGGTCAAC TGGCAAATAT CATAGGTGTT ATACTCGCCT CTCCGGTAGC TAACCGGCTC
GGTAAAAAAC GTACCTATCT CCTGGCAATG GTCCTGGCTA CCACAGGCAG TTGCTGCTTT
TATTTCCTGC AGAAAGAACA ACTCACCGGC ATATTCGTGC TACAGGCGCT GATCAGTACC
TGTGCTGGTA TTATTTTTCC CTTGCTTTGG AGTATGTATG CGGATATTGC TGATTACTCC
GAATGGAAGA CCGGCAGACG AGCAACCGGA CTGGTATTCT CTTCCTCTTC CATGTCCCAG
AAATTTGGCT GGACAATAGG TGGCGCACTG ACCGGCTGGC TCTTAGGTGT TTTCAATTTT
CAGGCAGATA CGACGCTCGA TACAACCGCA CAGACCGGGA TTATCAGTAT GCTGAGTCTT
ATCCCGGCCA TCGGCTCCTT ACTAAGCGTC GTATTCATTG CTGCTTACCC ATTATCAGAA
AACAAAATGA ATGAAATATC CCGTGAATTG GACATCAGAC GAAAAACAAC AGCTACCAGT
CAACACGCTG AAACAGGAAC TTTTACAGGA GCTTAA
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| Protein sequence | MSAPISLKEK VGYGFGDMAS SMFWKLFGMY LLFFYTDVMK LDAAAIGTMF LITRVWDTLF
DPFVGIITDR TQSRWGKFRP YLLMMALPFA IAGTLTFYTP SFAGGGRLVY AYVTYSLMMM
IYSLINVPYA SLLGVISNDG RERNTLASFR MSFAFAGSFM ALGLLEPLVQ YFTPYGLSAA
WVFAVSIIAV ICLLLFLLCF AWVKERVQPI QQQSGRLKDD FADLLHNKPW WILLGAGIAA
LIFNSIRDGA TVYYFKYYIT QNQAFNVAGI PFTYSTLYLL TGQLANIIGV ILASPVANRL
GKKRTYLLAM VLATTGSCCF YFLQKEQLTG IFVLQALIST CAGIIFPLLW SMYADIADYS
EWKTGRRATG LVFSSSSMSQ KFGWTIGGAL TGWLLGVFNF QADTTLDTTA QTGIISMLSL
IPAIGSLLSV VFIAAYPLSE NKMNEISREL DIRRKTTATS QHAETGTFTG A
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