| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5347 |
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| Symbol | |
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| ID | 8361524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6832989 |
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| End bp | 6835049 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967495 |
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| Product | protein of unknown function DUF1680 |
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| Protein accession | YP_003124979 |
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| Protein GI | 256424326 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.611947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.22403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTC GCTCCACGAT GCAAATACTC AGGTACACAC CCTCTATTAA GGTGCTTTCT
ATCAGCGCGC TGCTGGCCGG CAGCTTTGCT GTTCATGGAC AGACGGCTGC ACCGGTAGCC
CATATTATCC AGCCGGCGAC CTTGTCCCAG GTAAAGATCA AGGACGATTT CTGGACGCCG
AAATACAAGG TATGGACTAC GCATACGGTC TATGATGTGC TGGACAAATT AGAGGGTAGT
TATGATCCCG ACAGACAGGA TCTGATAGAT GAAAAACAAC GCCAGGGTAA AACGAGGAAT
GCCTTCCTGA ATTTCGACAG GGTGGCATCC GGAGAAAAGA ATACACAGGT GTTTGATGGT
CCGCCGTGGT ATGACGGACT GGTATATGAA ACCATCCGGG GCGCTGCTGA TCTTCTCAGT
CAGTACCCGG ATAGAAAGCT GGAAAAGAAA CTGGATGCTT ATATCGAAAG GATCGCAGCT
GCGCAGGCGG TGAATCCCGA TGGCTATATC AATACCTATA CTACCTTGAA CCGTCCCGGA
CAACGTTGGG GTACGAATGG CGGCGACGAC AAGTGGCAGC ACGACGTATA CAATGCCGGT
GCGCTGATTG AAGCGGCTGT ACACTATTAT CAGGCGACAG GTAAGACGCG TTTACTGAAT
GTGGCTGTGA AAATGAGTAA CTATATGTAT GCGCAGATGG GGCCGGCTCC TAAGCTGAAT
GTCATCCCCG GGCATGGTGG TCCGGAGGAA GCCTTATTGA AACTATACTG GTTGTTTAAG
ACAGCTCCTT CGCTGAAGGC TAAAATAAGC GTACCTGTAC ACGAAGAACA ATATTACAGT
CTGGTGCAGT TCTGGATCGA AAACAGGGGT AACTATGGCA GTGGTAGTTA TGCCCGTAAG
AGTGACGGCG CCTATAACCA GGACCATATG CCGATATTAC AGCAACAAAC CATAGAAGGC
CATGCAGTCC GCGCTACCTT ATTGGCAACC GGCGTTACTG CCATGGCTAT GGAAAATAAT
AATCCGGCTT ATTTTACGAC TGCTGTTCGT TACTGGGATA ATATGACGGG TAAACGCATG
TTTGTGACAG GCGGGGAAGG GGCCATTGCT GACCAGGAGA AGTTCGGTCC GGATTACTTC
CTGCCGGAAT CTGCTTACCT GGAAACCTGT GCCTCCATTG GGGCTGCATT TTTTAGTCAG
CGTATGAATC AGTTACTGGC AGATGGTAAG TACATGGATG AATTTGAACG CGTGATGTAT
AATAACCTGT TATCAGGAGT ATCATTGTCA GGTGATCACT ACTTTTACGA AAATCCACTC
ATTGCGAAGG ACCATAAACG CTGGGCATGG CACAGTTGTC CTTGTTGTCC GCCGATGATC
CTGAAAATGG TGGCAGCCAT ACCTGCGTAT ATTTATGCTG CTGATAATAC CGGTTTGTAT
GTCAACCTGT TTATCAGCAG TGAATACAAA GGTGCTGTAG GGGATAAGAA AGTCTCTTTG
AAACAATCCA CGCAATACCC TTGGAAAGGA ACGACTCAGA TAGCAGTTAA TCCTGCAGAG
GAAGGTGATT TTGCAGTAAG CGTGCGTATA CCCGGCTGGG CACAAGGCAG GGAAAATTAC
TTTGGTCTTT ATACTTCTCA GGTCACAACG CCTGTTTCCC TGCGTGTAAA TGGCGCGGCT
GTTCCTGTTC AGCCGGAGAA TGGCTATGTG CGTATCAAAC GTCACTGGAA GAAAGGAGAT
AAGATCATAT TGGCGTTGCC TATGCAGCCA AGACTGATAT TCCCGCATGA CTCGATACGG
ACAGTTCAGG GGAAGGCGAC GATTGCCGCA GGTCCGGTTA TTTACGGGCT GGAAGGTATT
GACAATAGTA AACTGGATAG TTTAACAATC AGCCGTAATA CTGCCTTACA ACTGGCATTT
AAACCAGGTT TCCTGGGAGG CGTGAATGTG GTCACAGGAC AGCTGGGCGG AAGTACATTT
ACTGCTATTC CGTTCTATAC GCTGGCTAAC AGACAAGTAG CGCCGTATAG GGTATGGTTG
CCGGTGGAAA AAGCAGATTA G
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| Protein sequence | MQARSTMQIL RYTPSIKVLS ISALLAGSFA VHGQTAAPVA HIIQPATLSQ VKIKDDFWTP
KYKVWTTHTV YDVLDKLEGS YDPDRQDLID EKQRQGKTRN AFLNFDRVAS GEKNTQVFDG
PPWYDGLVYE TIRGAADLLS QYPDRKLEKK LDAYIERIAA AQAVNPDGYI NTYTTLNRPG
QRWGTNGGDD KWQHDVYNAG ALIEAAVHYY QATGKTRLLN VAVKMSNYMY AQMGPAPKLN
VIPGHGGPEE ALLKLYWLFK TAPSLKAKIS VPVHEEQYYS LVQFWIENRG NYGSGSYARK
SDGAYNQDHM PILQQQTIEG HAVRATLLAT GVTAMAMENN NPAYFTTAVR YWDNMTGKRM
FVTGGEGAIA DQEKFGPDYF LPESAYLETC ASIGAAFFSQ RMNQLLADGK YMDEFERVMY
NNLLSGVSLS GDHYFYENPL IAKDHKRWAW HSCPCCPPMI LKMVAAIPAY IYAADNTGLY
VNLFISSEYK GAVGDKKVSL KQSTQYPWKG TTQIAVNPAE EGDFAVSVRI PGWAQGRENY
FGLYTSQVTT PVSLRVNGAA VPVQPENGYV RIKRHWKKGD KIILALPMQP RLIFPHDSIR
TVQGKATIAA GPVIYGLEGI DNSKLDSLTI SRNTALQLAF KPGFLGGVNV VTGQLGGSTF
TAIPFYTLAN RQVAPYRVWL PVEKAD
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