Gene Cpin_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5338 
Symbol 
ID8361515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6817540 
End bp6818415 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content47% 
IMG OID644967486 
Productfructosamine kinase 
Protein accessionYP_003124970 
Protein GI256424317 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3001] Fructosamine-3-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.357896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.249543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC ACTTCCTCTT CCACCTCACC ACCATCCTCA CCAACCACTG GCATTCCCCG 
GTCACCATCC ACAACTATAG TTCTGTCAGC GGTGGAGACA TCAACGAAGC TGCCATCATC
GAAACCAGCC GTGGTCCCTG GTTTCTCAAA CTTAATCACA GCAGTTACAC ACGGATGTTT
GAAAAAGAGT TTAACGGATT ACACTTACTT CAAAGTACCA ACACCCTGAA AACTCCTGCG
CCTTTATTAT ACGGGGATTG GCAGCAATAT GCTTTTTTGA TAATGGAATA TCTGCCCAAG
GGCCATGCAG GACCACAGAG CGTATCCTGG CTGGCAGAAG GACTGGCTGC TTTACACAGG
AACAGTCATG AACAGTTTGG CTTAGAAGAA GACAATTACA TCGGCACCCT TGTCCAGCAG
AATACCTGGA AAAGTTCCTG GGCAGCCTTT TATGCAGAGA ACCGCATTTT CCCCTTGGTA
AGGCAGCTGG TAGACATGAA GCATTTCGGG ACGAAAGAGA TCAGACTGGC GGATGCATTG
GCGATACGCT TAGCGGAAAT CTTTCCGGTG GAATCACCCG CTTTATTACA TGGCGATCTG
TGGGGAGGCA ATTATATATT TATGGGGAAC GGGGATCCGG CTATTTACGA TCCTGCGGTT
TATTATGGTC ATCGCGAAAT GGATATGGCT ATGACGATGT TGTTTGGCGG TTTTGATGCT
TCTTTTTACC AGCGTTACCA GGAGGTGTTT CCTTTGGAGG TGAACTGGCG CAAACGGGTT
TTACTTTGCC AGCTATATCC ATTGCTGGTT CATGCCATCT TATTCGGCGG ACATTATGTG
AGGCAGTCTG CCGGTATTCT TGAACAATAT GCTTAA
 
Protein sequence
MDKHFLFHLT TILTNHWHSP VTIHNYSSVS GGDINEAAII ETSRGPWFLK LNHSSYTRMF 
EKEFNGLHLL QSTNTLKTPA PLLYGDWQQY AFLIMEYLPK GHAGPQSVSW LAEGLAALHR
NSHEQFGLEE DNYIGTLVQQ NTWKSSWAAF YAENRIFPLV RQLVDMKHFG TKEIRLADAL
AIRLAEIFPV ESPALLHGDL WGGNYIFMGN GDPAIYDPAV YYGHREMDMA MTMLFGGFDA
SFYQRYQEVF PLEVNWRKRV LLCQLYPLLV HAILFGGHYV RQSAGILEQY A