Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5306 |
Symbol | |
ID | 8361483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6777510 |
End bp | 6778034 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644967454 |
Product | NusG antitermination factor |
Protein accession | YP_003124938 |
Protein GI | 256424285 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.955236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0968328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCAT CAATGTCTAT TACGCAGCAG CGTGAAAGTA AGTGGTATGT ATTGTATACA TATCCGCTGT TTGAAAAAAA GATAGGAAGG CAGTTAGCAC TAATAGATAT CATTCATTAT CTCCCGGTAA AAACAGAAGT GCGAAAGTGG AGTGACCGTC TCAAAAGAAT GGAAGTACCT TTATTCCCAA ACTACATATT TGTTAAAACA AACTTACTAA ACAAAACGCC TATACTGGGA ATTCCTGGTG TGGTCCGGTT TGTTTCTGTA GAAGGAAGAG CTATTGCTAT AAGTGAGGAT GATATCAATA AAATCAGGCA GATAGAACAG TCAAGACAGG ATGTGGAAAT AGAGTCTGTA TATAATACGG GCGATAAGAT AAGAATACTC AACGGGGTGT TTTCCGGACT GGAAGGAGAA TTGTATAAAA GATCAAATCG CCTGCGTGTT TTGATTAAAC TGCCGGTAAT AGCGCAGGCG GTATCAGTAG AGATCAGCAA CTGTGATATA GAAAAAATTG CCTGA
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Protein sequence | MRSSMSITQQ RESKWYVLYT YPLFEKKIGR QLALIDIIHY LPVKTEVRKW SDRLKRMEVP LFPNYIFVKT NLLNKTPILG IPGVVRFVSV EGRAIAISED DINKIRQIEQ SRQDVEIESV YNTGDKIRIL NGVFSGLEGE LYKRSNRLRV LIKLPVIAQA VSVEISNCDI EKIA
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