Gene Cpin_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5306 
Symbol 
ID8361483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6777510 
End bp6778034 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content39% 
IMG OID644967454 
ProductNusG antitermination factor 
Protein accessionYP_003124938 
Protein GI256424285 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.955236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0968328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAT CAATGTCTAT TACGCAGCAG CGTGAAAGTA AGTGGTATGT ATTGTATACA 
TATCCGCTGT TTGAAAAAAA GATAGGAAGG CAGTTAGCAC TAATAGATAT CATTCATTAT
CTCCCGGTAA AAACAGAAGT GCGAAAGTGG AGTGACCGTC TCAAAAGAAT GGAAGTACCT
TTATTCCCAA ACTACATATT TGTTAAAACA AACTTACTAA ACAAAACGCC TATACTGGGA
ATTCCTGGTG TGGTCCGGTT TGTTTCTGTA GAAGGAAGAG CTATTGCTAT AAGTGAGGAT
GATATCAATA AAATCAGGCA GATAGAACAG TCAAGACAGG ATGTGGAAAT AGAGTCTGTA
TATAATACGG GCGATAAGAT AAGAATACTC AACGGGGTGT TTTCCGGACT GGAAGGAGAA
TTGTATAAAA GATCAAATCG CCTGCGTGTT TTGATTAAAC TGCCGGTAAT AGCGCAGGCG
GTATCAGTAG AGATCAGCAA CTGTGATATA GAAAAAATTG CCTGA
 
Protein sequence
MRSSMSITQQ RESKWYVLYT YPLFEKKIGR QLALIDIIHY LPVKTEVRKW SDRLKRMEVP 
LFPNYIFVKT NLLNKTPILG IPGVVRFVSV EGRAIAISED DINKIRQIEQ SRQDVEIESV
YNTGDKIRIL NGVFSGLEGE LYKRSNRLRV LIKLPVIAQA VSVEISNCDI EKIA