| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5298 |
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| Symbol | |
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| ID | 8361475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6769638 |
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| End bp | 6770309 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967446 |
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| Product | protein of unknown function DUF98 |
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| Protein accession | YP_003124930 |
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| Protein GI | 256424277 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0556574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCTGA ATGAAATCAT TGTTTTGTAT TCCGCCGGTG AACTTTCCGG ATATGAAGTA
AAGGAAAGAA TCAATGCACT TGGCATCACC CAGACTGAAT CCGGCAGAGG TGCTGAAAAT
GCCTCTCTCT GGACATTACA GGACGAATTA CCAGCCACCC AGCCAGACAG ATCTCTGCTG
CATGGTGAAG TCCTCAGTCT TTTTCAGAAG ATATTACTGA CTACAGATGG TACAGTCACT
GATCTGATCT CATTGTATAA AAATGAGAGC ATCAAGGTGG ATATCATTGA TCAGGAGATC
GTATTTGCGG ATGCACCGGC CTACCTCCAA TGTGGTAGAG AGGCGCTTTT GCTGAAAAGG
ATCGTCCTGC TGAAAGGGCC TTCCGGTAAC CATGTATATG CGGAATCTAT TTTTGTGATT
GAGCGCTTAT CGGAAACTAT CAGGGAGCGT CTGCTGGAGA CAAACCTGCC GATAGGATTG
CTCTGGAAGG AAGAAAGACT GGAATCGCAC AGAGAGATAC TGACCTACTA CATAGAACGA
GAAGATAAGG TAAGTGCATT GCTGGGACAA CCAGCGGGCA GCGACCTGCT GAGCAGGACT
TACCTCATTC ACAACAAGCA GTCGGTGTTA GGAGCCATTA CTGAGAAGTT TCCGTTAACA
AGTTTCAGAT AG
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| Protein sequence | MDLNEIIVLY SAGELSGYEV KERINALGIT QTESGRGAEN ASLWTLQDEL PATQPDRSLL
HGEVLSLFQK ILLTTDGTVT DLISLYKNES IKVDIIDQEI VFADAPAYLQ CGREALLLKR
IVLLKGPSGN HVYAESIFVI ERLSETIRER LLETNLPIGL LWKEERLESH REILTYYIER
EDKVSALLGQ PAGSDLLSRT YLIHNKQSVL GAITEKFPLT SFR
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