| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5241 |
|---|
| Symbol | |
|---|
| ID | 8361418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6625884 |
|---|
| End bp | 6629843 |
|---|
| Gene Length | 3960 bp |
|---|
| Protein Length | 1319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644967389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124873 |
|---|
| Protein GI | 256424220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000238802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000000023069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG CAACCGATAA TAAAAGCAAA ACTGCAAAAA CGAGGCAACA GCCTGCAGGC
GGCTCCTTCT TCAACAAAGA TAAGGGAGCT GACAGCGCGT TTTTGGGGGA GACTGCCGCA
TCGGAAGAAC CCTTTTTCGT TCAACGGAAA CTTACCATCG GAAAACCAGA TGACCATTAT
GAGAAGCAGG CTGACCAGGT AGCTGACAAG GTAGTACAGC GCATGAGTCA ACCAGCGCCC
GTACAAGCCA AGGCGGCTAC ACCTTCTCCT GTCAGTACTG TTCCTTCCGG CAGTGTGCCG
GCATCCGCTG CACAGCCTGC GGTGATGCAA AAGAAAGAGC AGGAGAAGAA AGAAGAAGAT
ATACAGCCGG ATGAAAAGAA GCTGCAACGC AAGCCTATAT TCGATAGTAT GGGCGATCCG
CCGGATGATA TCCAGAAGAA AGAAACTGCG CAGGCGCCTG CACCTGCAGC AGATACGAAG
GCGAGTGGCG GCAATCATCT TGAACAGCGT TTACAAAGTA CTAAAGGTGC GGGTTCGCCC
TTGGCATCAG AGACACGCTC TGCAATGGAA TCTGCCATTG GCGCTGACTT TAGTGGTGTG
CGCGTACACA CCGGTAAAGA AGCAGCAGAA CTGAGTAATG ATCTGCAGGC GCAGGCCTTC
ACACATGGCA ATGATATTTA TTTCAATGAG AATAAGTTTG ATGAAAGCAG CAGTACGGGC
CGGCATTTGC TGGCGCATGA ACTGACGCAT ACCGTACAAC AAGGTGCTGC TGTACAGCGA
AAGGCTACAC CTGAAAGCGG AGCGTTGAAA GAAGACGCAC CTGTAGCGGC AACTGGTAAA
CAGGGCGCAT CTGCAGTACA AACGAAAGCG GATACTACTT TGAGTGCGGA TGGTATGACC
ATACAGCGTG CACCTGCCAA AGCTGGTGGA GCGCCCTCAG CGGCGGTATC AGGAGAGGTG
GTGAATATTG CAGCGGGTAA ATTTAATCCG TCTGCCGCAT TGCAGGAGGC TATCCGTGCA
TCGGAAAGAA AAGGACTGGA TGTGAATGTC AGCGCTGGTA AGATAGCGGG CGCCGGCGTT
ATGAAAGTGC GGGAGAAAGA TGGTGTGATG GAGAGTCTGA AGAATGCTTA CCTGCCATTG
AACATGCCGA TGTTCAGCGC TGCGAATCCT ATGTTGGCCG TAAGACTGGC CAGCGGAGAG
ATCAGTGGTT TTGCTACGAT CGGACAAAGC AATATGCCGG AGGCTATTCC GCAATGGCTG
CGTAAGAATG GTAAAGCAAT TGGCTGGCTG ACGGGTATCG ATGTAGAAAA TGTATTATCC
AAAGCAACGA ATACGTTTGA GAACGGCAAC TTCACCTTTA CCCTGAATGG TATCAAGGTG
AAGGTAGGCG GTTTTGCATC CGCGACGATG GATCTTGGCT TTACGAATAT GCAGCCTTCT
GCACATGTGG TGGCAGAAAT GGATATTCAT GGTATGGCGA AGGGCAACCT TGATATCACA
CTGGCAGAAG ATAAGATGTC AGGTGAGGGA GCATTTGGCG TGAGCTTCAA AGGATTCTCC
GGAGAAGTGG CGGCGAAGTT CCAGGAGGGT GTGCTGGATG TCAAAGGCAT GGTACAGTAT
GACGGTGATA AGCTGAGCGG TTCGCTGATG CTTGTCATGA CGGATAAGAA AACAGCTGAC
AACTTTGCGG TGACACAACT GGGTGGTGCA CCGGCGGCAG AAGCCGCGCC ACCGGCAGAA
GTGCCTGCTG CGGCACCTGG AAAAGGACCA CGTGGTATGG CGGGTGTCGG TACACTGACC
TTCAACCTGA CAGAGTGGTT TGCCGGTAGT GTGAATGTGA TTGTAGATGG TAAGGGATGT
GTGACGGTCG TCGGCAAGAT TGCACCGCCA AAAGAAATTA TTCTGTTCCA GCAGAAGGAT
TACAGCAAGG AACTGTTTAA GATGGAGGCC CGCGCGGCTT ACGGTCTGCC GGTAATAGGC
AACGTATTTG TCTTCGCCAA CATGGCATTG ATTGCGATGG CGAAAGTGGG TCCTGCGAAA
ATATACAATA TCGAAGTAGA AGGTACGTAC TCTAATAACC CTGACATTGC GAAGAGCATT
ACCTTATCAG GTTCACTGAA TATGTCTGCT TATGCCGGTC TGCGTCTGCG CGCAGAAGGT
GGCGCAGGGC TGGAGCTCTT AGGACATGAT CTGAAAGTAG GTGTCGGCGT GAATGCGGAC
GCTGGTGTGA AAGGATATGT GGATGCGCGT CCGACAATCG GTTATCGTGA TCCGGGAGAG
TTCTTCTTCA AAGGACATAT GGAGATTGCG GCACAGCCGT TCCTCGGACT GAGTGGCGAT
CTGTTTGTGG AAGTGGATAG TCCGTGGTGG TCGCCATTAC CAGATAAGAA ATGGACATGG
CCGATTGGTG CGCTTGAATA TCCGTTACCA GGAGAATTTG GTATCGGCGC TGATATGGAA
TACGTATTAG GTTCTGGTAA GGTGCCTGAG GTGACATTCA GCGAAGCGAA ATTTGATGGC
GGCAAATTCA TGACAGACCT GGTAGATGAT CATGTGCCGG GCAAGAGTGG TGCAGGCGAT
AAAGAGAAAC AAGGCAAATT TACAGATGGT GGTGGTGCAG GCGCAGCTCC GGCAGCAGGT
GCACCTCCAC CGGCAGCAGC TGGTGGTAAA CCAGGCGCTC CGGGAGGTAA ACCGGGAGCA
CCGGCAGCAC CAGGTAAAGG CGGTGCCGGC GGACCAGGTG GCGGTAAAGG AGCTGGTAAA
GATAAAGGCG CGGATAAAGC CGATCCGGAA CAGATGAAGA ACTTTGCTGC AGCGATGCAG
AAGGTAAAAG CACTGGAAGG GCATAAACCA ATGACCCGTG AGGAACTGAC AGGCGCTATT
GAAGGTATCA AAAAACAGCA CAATACACCG GGTATCACTT TCGTGCCGCA GGGTAATGAT
CTGTGGATTG TTACGGGTGT CATAAAGGGA CAGCCTAACA AACAGTCGGT GAAGGTGAAA
GCGAATATGA AACCTGGGGA CGAGAAGGAT AAGAAAGGAG ATGACAAGGA TAAAGAAAAA
CAGGTAAGTC TGGGTCTGCA GGCGATTGAT ACGGAGGAAA AGCAATACAT GGCCAAAGGT
GGTCTGACCA GGGAAGAGGC AGATAAAGTG GCTACCACTG TAAAAGGTCA TCATCCGATA
TTTAAAGCGA TTACAGTTAT CGATGGTGGT AAACGCTGGG ATTACAGTTA TGTACAGGCT
GCGAAGATCA AACCGGGAGA GCCGAAAGCG CCTCCTACGA AGGCGCAGTT CCTGGCCTGG
CTGAAGGCTA AATTCGGGGT GAAAATATTC CGTGGAGACG ACTATCGTGC CTATGTGCGG
GAAAAAGGTA TCGATGATGA TACCGGTGCT GCATGGCGTA AGGAATGGGT AGATAATGCC
GTTCTGTACA GACAGGTATC TTCCAAGGGT GCGAATGACC CTTATCCAAA CCTTTGTTTT
GCAGACGTAT TCAAAGAAGA GCCGCGTGAA ACAGATATTG ACAGAAGATA TGATTACGGT
TATGGTAACC CAAGCAAAGA CAGTAAAACA GGCCTGGCAA TCATCAAGAA AAGCCTTATC
AGAGCGAAAA AATATGGCTG GAAAGAAGGT TTGGAAGATG ATCCTACTTA TCTGAAATCA
AAGTTCGCGC GATATGAGTG CAAAAGAACA AAGGATATCG TAACTTACGA AAATATTGTA
CTTGGACATG ATGATAAGGA AGGTGCTTCT GAGAACTGGA ACAGGATCGG GCATACCAAA
CATCGTACGG TGAATGTTGC GTGGAATAAC AATCCTGATA ATTATTGGGG TGTTGAAAGT
CCGGCGGCTT CTCAGGTAAG CTCCAGTAAA GCGCCACGTT ACAAAGAACC CGGGCCAGGC
AGTCATCCGA TGTGGTGGAA AAAGGATCAT GCTGAGTATT ACTTCAAGAA CAAAAAATAA
|
|---|
| Protein sequence | MIKATDNKSK TAKTRQQPAG GSFFNKDKGA DSAFLGETAA SEEPFFVQRK LTIGKPDDHY
EKQADQVADK VVQRMSQPAP VQAKAATPSP VSTVPSGSVP ASAAQPAVMQ KKEQEKKEED
IQPDEKKLQR KPIFDSMGDP PDDIQKKETA QAPAPAADTK ASGGNHLEQR LQSTKGAGSP
LASETRSAME SAIGADFSGV RVHTGKEAAE LSNDLQAQAF THGNDIYFNE NKFDESSSTG
RHLLAHELTH TVQQGAAVQR KATPESGALK EDAPVAATGK QGASAVQTKA DTTLSADGMT
IQRAPAKAGG APSAAVSGEV VNIAAGKFNP SAALQEAIRA SERKGLDVNV SAGKIAGAGV
MKVREKDGVM ESLKNAYLPL NMPMFSAANP MLAVRLASGE ISGFATIGQS NMPEAIPQWL
RKNGKAIGWL TGIDVENVLS KATNTFENGN FTFTLNGIKV KVGGFASATM DLGFTNMQPS
AHVVAEMDIH GMAKGNLDIT LAEDKMSGEG AFGVSFKGFS GEVAAKFQEG VLDVKGMVQY
DGDKLSGSLM LVMTDKKTAD NFAVTQLGGA PAAEAAPPAE VPAAAPGKGP RGMAGVGTLT
FNLTEWFAGS VNVIVDGKGC VTVVGKIAPP KEIILFQQKD YSKELFKMEA RAAYGLPVIG
NVFVFANMAL IAMAKVGPAK IYNIEVEGTY SNNPDIAKSI TLSGSLNMSA YAGLRLRAEG
GAGLELLGHD LKVGVGVNAD AGVKGYVDAR PTIGYRDPGE FFFKGHMEIA AQPFLGLSGD
LFVEVDSPWW SPLPDKKWTW PIGALEYPLP GEFGIGADME YVLGSGKVPE VTFSEAKFDG
GKFMTDLVDD HVPGKSGAGD KEKQGKFTDG GGAGAAPAAG APPPAAAGGK PGAPGGKPGA
PAAPGKGGAG GPGGGKGAGK DKGADKADPE QMKNFAAAMQ KVKALEGHKP MTREELTGAI
EGIKKQHNTP GITFVPQGND LWIVTGVIKG QPNKQSVKVK ANMKPGDEKD KKGDDKDKEK
QVSLGLQAID TEEKQYMAKG GLTREEADKV ATTVKGHHPI FKAITVIDGG KRWDYSYVQA
AKIKPGEPKA PPTKAQFLAW LKAKFGVKIF RGDDYRAYVR EKGIDDDTGA AWRKEWVDNA
VLYRQVSSKG ANDPYPNLCF ADVFKEEPRE TDIDRRYDYG YGNPSKDSKT GLAIIKKSLI
RAKKYGWKEG LEDDPTYLKS KFARYECKRT KDIVTYENIV LGHDDKEGAS ENWNRIGHTK
HRTVNVAWNN NPDNYWGVES PAASQVSSSK APRYKEPGPG SHPMWWKKDH AEYYFKNKK
|
|---|
| |