| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5237 |
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| Symbol | |
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| ID | 8361414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6620986 |
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| End bp | 6622365 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967385 |
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| Product | AAA ATPase central domain protein |
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| Protein accession | YP_003124869 |
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| Protein GI | 256424216 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.368199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000902621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGATA ACCAAAAGAA TGCAGACGTC CTGCAGGAGT ATTTATCCTG GTTGCAGGAG
GAAATGAAGA AAAGGCTGGG CCAGTATTTT GGTCCGGAGA ACAATGTCGT CCCTGTTATA
CCCTCTCCTG ATGCAGCACC TGGCGCTTCC TGGCCGGATG CGCCTATCGT CCGGTTTATC
AATGACAACC AGCTGGATAA GGAGTCTCAG TTATTACTGA TCATGGCGCT GGCGCCGCAT
GTCAATGCCG TATTCTTTGA GCATGTCATT AATGAATACC TGATAGATAA AGGGGATTTC
CCGTTGATTG GCTGTGTGAA AGGCACACAG TTCCGCGGAC TGTTACCAAC AGGCGATACT
TTTTTGTTCC TGCTGGCAGG CGGTAATCTG TCCGCACGTA TTGATAAAAT GCGCTACTTC
AGTGAATCGC ATGTGTTTGC ACAACGTCAT GTGCTGTGGC TGGAGAAGCC GGAAGAAGGA
GAGCCGGCAA TGAGTGGCAG GATTGTATTG TCGCAGGAAT TCATTGACCT GTTCCTGACA
GGGTCTTATG CAAAACCGCG CTTTGGCAAT GATTTTCCGG CAGAAAGTAT CACCACCCCG
CTGGACTGGT CGGACCTGGT GTTGAATGCA CAGACCATGG ATCAGTTGCA GGAATTGAAG
AAATGGTTAC GACTGAAAGA TAAATTACGT GCTACTAATA AACGGCTTAA ACCGGGTTAC
AGGGCACTGT TCTATGGCCC TCCGGGGACC GGTAAAACTT TGTCTGCCTG TTTGCTTGGC
AAGCGTGATC CTGCAGAAGA TCCGGGTGGT TTACCGGATG ATCTGGATGT ATTCCGTATT
GACTTGTCCC TGGTGGTGTC CAAATTCATC GGAGAGACAG AGAAAAACCT CTCTGGTCTG
TTTGACAGGG CGGAGCATAA GAACTGGATC CTATTCTTTG ATGAAGCAGA TGCTTTATTC
GGGAAGCGTA CCAACATCCG GGATGCGCAC GATAAATATG CTAACCAGGA GATCGCCTAT
CTGTTACAGC GTATAGAAAA CTATAACGGA CTGGTGATCC TGGCGTCCAA CTTTAAGAAT
AATATCGATC CTGCTTTCTC CCGTCGTTTT CAGTCTATTA TACAATTCCC GATGCCGAAT
CAGGCGGAAC GGCTGCAACT CTGGAAGATG ATTCTGCCGG ACCATATGAT GCAGAAAGAG
GGTATACTGG AAAAACTGGC GGCTACGCAT GAGATTTCCG GCGCTTCGAT CATTAATGTG
GCACAGTATT GTTTTCTGAA GAATATGCAG CCAGGCGGAG AGATATTGCC GATATCGGCT
GTGGATGTGG AAGAAGGACT GGTGAGGGAG TTTAACAAGG AAGGCAAGAT CTATAAATAA
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| Protein sequence | MIDNQKNADV LQEYLSWLQE EMKKRLGQYF GPENNVVPVI PSPDAAPGAS WPDAPIVRFI
NDNQLDKESQ LLLIMALAPH VNAVFFEHVI NEYLIDKGDF PLIGCVKGTQ FRGLLPTGDT
FLFLLAGGNL SARIDKMRYF SESHVFAQRH VLWLEKPEEG EPAMSGRIVL SQEFIDLFLT
GSYAKPRFGN DFPAESITTP LDWSDLVLNA QTMDQLQELK KWLRLKDKLR ATNKRLKPGY
RALFYGPPGT GKTLSACLLG KRDPAEDPGG LPDDLDVFRI DLSLVVSKFI GETEKNLSGL
FDRAEHKNWI LFFDEADALF GKRTNIRDAH DKYANQEIAY LLQRIENYNG LVILASNFKN
NIDPAFSRRF QSIIQFPMPN QAERLQLWKM ILPDHMMQKE GILEKLAATH EISGASIINV
AQYCFLKNMQ PGGEILPISA VDVEEGLVRE FNKEGKIYK
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