Gene Cpin_5211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5211 
Symbol 
ID8361388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6584638 
End bp6585408 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID644967359 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003124843 
Protein GI256424190 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000595972 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACA CAATGAATGA GAACAACAAT CGTCCGGCGT CTGATATTCA GGGTAAATCT 
GTTATCATTA CCGGTGGAAC AACCGGTATC GGGAGAGCCA CTGCTATTCT GATGGCATCC
CGGGGCGCCA ATGTACTCGT AGTCGGAGAA GATCCTGTTC ACCTGAAAGA CACGATTAGC
AGTGTTAATC ATGAAGAACT GGAAGGTAGT CTTACCGGAC TGACGGCCGA TCTGGCGACA
GAATCGGGTA TAGACAGCCT CTTTAGTACA GCCGACAAAC AGTTTGATAA ACTGGACATA
CTTATTAACA ACGCAGCATT GGCCTGGCAA GGGGTGCAAA GCGGTCGGTA TCAGGATTGG
CAAAAGGTCA TTAATACTAA TCTTCTCGGG TACATCGCAT GTACGCAGCA GGCATTGGAG
CGTATGAAAA AGCACAAGGA CGGGCATATT GTTAACGTCG GCTCCATGAG TGCAGATGTA
CGGGAAAAGG ACAGTTCGGT GTATGTTGCT ACCAAAGCCG GCGTACAGGG ATTTTCGGAA
AGTCTGCGTA AGGAGGTAAA TGAACTCGGT ATAAAGGTAT CGCTTATCGA ACCCGGCGCC
GTTGGTACAG ATATGCAGCC AGTGAGTGTA CCTGATCAGC AGCAAAAAGA AGAAAAGCTC
GAAATGCTGA CTGCTGAAGA TATCGCCGCT GCCGTTTTAT ATGTTGTTTC ACAGCCTAAA
AGATGCGATG TCGTTGACGT GAAGATCCGT CCACATCTGC AACTGATCTG A
 
Protein sequence
MTHTMNENNN RPASDIQGKS VIITGGTTGI GRATAILMAS RGANVLVVGE DPVHLKDTIS 
SVNHEELEGS LTGLTADLAT ESGIDSLFST ADKQFDKLDI LINNAALAWQ GVQSGRYQDW
QKVINTNLLG YIACTQQALE RMKKHKDGHI VNVGSMSADV REKDSSVYVA TKAGVQGFSE
SLRKEVNELG IKVSLIEPGA VGTDMQPVSV PDQQQKEEKL EMLTAEDIAA AVLYVVSQPK
RCDVVDVKIR PHLQLI