Gene Cpin_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5174 
Symbol 
ID8361351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6455604 
End bp6456500 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content47% 
IMG OID644967322 
ProductPpx/GppA phosphatase 
Protein accessionYP_003124806 
Protein GI256424153 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.985402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0128836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTG CTGTCATAGA CCTCGGTACA AACACCTTCC ACCTGATCAT CGCTGATCTT 
TCCGGTGAGG AGAAAAAGAT CCTCTATAAA ACCACTGTTC CGGTCTTATT GGGCCAGGGC
CGTATTAACG AAAACATGAT CATTCCCGAG GCTTTTGAAA GAGGGATCAA TACCCTGAGA
AATTTCAAAA GCATCATTGA CGCGCATCAT ACAACATTGA TAAAAGCGAC CGCCACATCC
GCAGTAAGAA GTGCTGTAAA CGGACAGGAC TTTGTTGATA GTGCGCGGGA AGTAGGTATC
CATATAGATA TCATCACTGG AGAAGAAGAA GCTGCCTATA TTTTCAAAGG CGTACGCGCC
ACTGGCATCA TTCAGCAAAC CTCGCTGGTA ATGGACATCG GCGGTGGCAG CACGGAGTTT
ATTCTCTGCA ATAAAGAAGG ACAGATCTGG AAGAAAAGCT ATAACATTGG CGCCGCCCGC
TTGATGCAGG CTTATTTCCA CTCCGATCCG ATCAGTCAGG ACGAACAACA ATCTATCGTC
GACCTACTCG ACAATACTTT GCTGGAACTG AAGACAGTCT GCGCAACACA TCAACCTGAG
ATGCTGATCG GTTCTGCCGG CGCCTTTGAA TCATTTGCCG CCATGCTGAA TAACGGAGAA
GAAGTGACCG ATATAGCAGC CATACCCCTG GATATCAACC GTTATAAAGC ACTGGCAACC
CGGCTGATTG CGTCTACGCA CGAAGAAAGG ACACACATGA AAGGACTCAT CTCTTTAAGG
GTAGACATGA TCGTCATCGC CTCCATCCTC ACCAACTACA TCCTGGAAGA AATTAAACTA
AATGCCCTCA GTCTGTCAAC ATATGACCTG AAGATGGGCG TACTGTATTC ATTATAA
 
Protein sequence
MRAAVIDLGT NTFHLIIADL SGEEKKILYK TTVPVLLGQG RINENMIIPE AFERGINTLR 
NFKSIIDAHH TTLIKATATS AVRSAVNGQD FVDSAREVGI HIDIITGEEE AAYIFKGVRA
TGIIQQTSLV MDIGGGSTEF ILCNKEGQIW KKSYNIGAAR LMQAYFHSDP ISQDEQQSIV
DLLDNTLLEL KTVCATHQPE MLIGSAGAFE SFAAMLNNGE EVTDIAAIPL DINRYKALAT
RLIASTHEER THMKGLISLR VDMIVIASIL TNYILEEIKL NALSLSTYDL KMGVLYSL