Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5088 |
Symbol | |
ID | 8361264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6334805 |
End bp | 6335464 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967236 |
Product | beta-phosphoglucomutase |
Protein accession | YP_003124721 |
Protein GI | 256424068 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01990] beta-phosphoglucomutase [TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00016924 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.408522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTAT TTGAAGCATG CATTTTTGAC CTGGATGGGG TGATCGTAGA TACCGCTGTC TATCATTTTA AAGCCTGGAA AAGGCTGGCT AATGAGTTAG GGTTCAATTT TACGGAAGCG CAGAATGAGA AGCTAAAAGG AATCAGCAGA GTTAAATCAC TCGAACTGAT CCTGGCATGG GGTGGTATGG AGAAATCTGC TGAGGAGCAA CAGATACTTG CTACCCGTAA AAATGAGTGG TATGTTGACA TGATCCATCA TATGACGCCG GAGGAGATAC TCCCGGGAAC AAAAGAACTA CTGGATAATC TGCGTGCTGC CGGTATTAAG ACAGCCCTGG GATCAGCCAG TAAGAATGCA ACTGTTATAC TGGAGAAAGT AGGCATTCTG CCTTTGTTTG ATGCATTGGT AGATGGGAAT ACTGTTTCCG CTTCCAAACC CGATCCGGAA GTCTTCCTGA AAGGGGCTGA AGCCCTGGGC ATATCACCGG CAAAATGCAT CGTTTTTGAA GATGCCATTG CCGGCGTTCA GGCGGCTAAA GCTGCTGGTA TGAAGGTAGT CGGCATAGGA GAGGAGGACG TACTGGGAGA GGCTGACCTG GTAGTCAGCA GCCTGGAGCA GATCGATCTG CAAACACTGA CCAACTTATA CTCAAAATAA
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Protein sequence | MQVFEACIFD LDGVIVDTAV YHFKAWKRLA NELGFNFTEA QNEKLKGISR VKSLELILAW GGMEKSAEEQ QILATRKNEW YVDMIHHMTP EEILPGTKEL LDNLRAAGIK TALGSASKNA TVILEKVGIL PLFDALVDGN TVSASKPDPE VFLKGAEALG ISPAKCIVFE DAIAGVQAAK AAGMKVVGIG EEDVLGEADL VVSSLEQIDL QTLTNLYSK
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