| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5079 |
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| Symbol | |
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| ID | 8361255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6323396 |
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| End bp | 6325105 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967227 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003124712 |
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| Protein GI | 256424059 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.623805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATA TTAATACGAG TGCTCAGGAC CGCACATTTG ATGCGATTGT GATAGGATCA
GGTATCAGTG GAGGATGGGC AGCAAAAGAG TTCACGGAGA AAGGTTTGAA AACGCTGGTA
CTGGAAAGAG GCCGCGACGT AAAGCACCTG AAAGACTATC CCACAACAAA CAAATATCCC
TGGGAATTTC CACACGGCGG ACAAATACCG GAAGCGATCA AGGAAGAAGC GCCTGTCGTA
AGCCGTTGTT ATGCCTTTAA AGAGGATGCG ATGCATTTCT TTGTAAAGGA TAAAGAACAT
CCTTATGAGC AGGATAAACC ATTTGACTGG ATCCGTGGAT ACCAGGTCGG TGGTAAATCA
TTGCTCTGGG CAAGACAGAC ACAACGCTGG AGTGACTATG ACTTCGAAGG GCCTGCAAGG
GACGGCTTCG CAGTAGACTG GCCGATCCGC TATGCAGATA TCGCTCCCTG GTATAGCTAC
GTAGAGAAAT TTGTAGGTAT TTCAGGTAAT AAGGATGGTA TCGATAACCT CCCTGATGGC
GAATTCCTGC CACCTATGGA GCTGACTGCC GTTGAGCAAT ACTTTCAAAA GTTTGTAAAA
GACAATTATA AAGATCGTCA CGTTATATAT GGCCGCTGCG CGCATCTTTC CGAGCCGCAG
CAAATCCACA TCGAACAGGG TAGGGTACAA TGCCAGAAGA GAAATCTTTG TCAGCGTGGA
TGTCCCTTCG GCGGATATTT CAGCAGTAAC TCCTCTACAC TGCCATGGGC AGAAAAAACG
GGTAATCTGA CACTCCGCCC GCATTCCGTT GTACACTCTG TTATCTACGA TGAAAAGAAA
GGTAAGGCAA CCGGCGTGCG TGTGGTAGAC GCGAAAACCA AGGAAATGAC CGAGTACTAT
GCCCGTGTCA TCTTCGTAAA CGCATCTGCG ATCAACTCAA ACCTGATCCT GCTCAATTCC
ACTTCCAGCC GTTTCCCGAA TGGATTGGGT AATGACAGCG GGGTATTGGG TAAATACTTC
GCTTTCCATA ACTACCGCGC TACCATTTAC GCAGACCATG ATGGTCATAT GGACGTTACC
ACCGATGGCC GTCGTCCTAC CAGCGCATAC ATTCCCCGCT TCCGGAACGT GAAGAAACAG
GAGACAGACT TCCTGCGTGG ATATGCTGCC GGATTTGATA CTGGCCGCCG TAAATGGAAT
AGCCATGATG GTATTGGTAA GAGCCTGAAG GATAATCTGT TCAACGAAGA AATGGGTAAC
TGGTACGTAG GATCTCATAT GATGGGTGAA ACCATCCCGA AAGAGATCAG TCAGCTGACC
CTCGATAAAG ATAAAAAGGA TGAATGGGGG ATGCCTGTTA TCCATGTCAA TATCGGCTAC
GATGATAACG ATGAGAAGAT GGTGAAGGAC TTCCATGAGC AGATGACTGA AATGTACACC
AAAGCCGGTT TCACCAATAT CCGTACAGGC GATTCCAAAC AGGCGCCAGG GCTCGATATT
CATGAAATGG GTGGTGCGCG CATGGGGAAA GATCCGAAGA CATCCGTACT CAATAAATGG
AATCAGTTGC ACGACGTGAA TAACGTATTT GTGACCGATG GAGCTTGTAT GACTTCTACT
TCTACGCAGA ACCCATCACT GACTTATATG GCACTTACTG CCAGGGCAGT GGACTATGCG
GTTAGCCAGA TGAAGAAAGG TGAAATATAA
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| Protein sequence | MANINTSAQD RTFDAIVIGS GISGGWAAKE FTEKGLKTLV LERGRDVKHL KDYPTTNKYP
WEFPHGGQIP EAIKEEAPVV SRCYAFKEDA MHFFVKDKEH PYEQDKPFDW IRGYQVGGKS
LLWARQTQRW SDYDFEGPAR DGFAVDWPIR YADIAPWYSY VEKFVGISGN KDGIDNLPDG
EFLPPMELTA VEQYFQKFVK DNYKDRHVIY GRCAHLSEPQ QIHIEQGRVQ CQKRNLCQRG
CPFGGYFSSN SSTLPWAEKT GNLTLRPHSV VHSVIYDEKK GKATGVRVVD AKTKEMTEYY
ARVIFVNASA INSNLILLNS TSSRFPNGLG NDSGVLGKYF AFHNYRATIY ADHDGHMDVT
TDGRRPTSAY IPRFRNVKKQ ETDFLRGYAA GFDTGRRKWN SHDGIGKSLK DNLFNEEMGN
WYVGSHMMGE TIPKEISQLT LDKDKKDEWG MPVIHVNIGY DDNDEKMVKD FHEQMTEMYT
KAGFTNIRTG DSKQAPGLDI HEMGGARMGK DPKTSVLNKW NQLHDVNNVF VTDGACMTST
STQNPSLTYM ALTARAVDYA VSQMKKGEI
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