| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5043 |
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| Symbol | |
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| ID | 8361219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6289512 |
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| End bp | 6290996 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967192 |
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| Product | cytidyltransferase-related domain protein |
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| Protein accession | YP_003124677 |
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| Protein GI | 256424024 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.516423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0391511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA TATATCAGAC ATTAATCAGG TCTTTTGTAC AACCGGCTAT CCTGGTAGTA
GGAGACTTGA TGATAGATAC GTACCTGAGA GGGGCGAGTA CCCGTCTTTC TCCGGAAGCG
CCGGTACCGG TTGTTGATAT CAGTTCCCAG ACTTCGGTAT TGGGTGGAGG CGCGAATGCG
GCTGTTAATC TGCGCAACCT GGGTGCAAAC GTTACTTTCG TCAGCCTGAC AGGTGATGAC
TATGCTGCAG GACTCGCCGC TGAATTACTG GAACGGGAGG GGATCAGCAA TGAAGTGATC
CGTTGTAATA CAAGGAGGAC GATTACTAAA ACGAGGGTGA TCGCCGGACA ACAATTACTG
ACCCGCTACG ACGAGGGAAC CGAAGTGCAA CCGGACGAAG ATTGCGAAAG GCAACTGATA
GCCATGCTGG AGCAGCAGTT GCCATTGCAT GATGCTATTC TGATCGCTGA TTACAATAAG
GGACTGATCA CAAAAGGTAT CATCGATGCA TTGGAACAGA TGAACCATGT ACATAAGAAG
TTTATTGCCG TGGATGCGAA ACAATTGTCC CGCTATAAAC AATTACAGCC TGACCTTGTA
AAGCCTAATT ATAAAGAAGC TGTTGCATTA CTGGGATTAC AGGAACTGGC GACCTGCAAA
GCCAGACAAA TGGAGGAAAT GGGCGCCGCT ATCTTCGACG CGACGAATGC CCGTATCACA
GCGCTCACAT TGGATGAGGA AGGCGCATTG ATCTTCAGGG AAGATAAACT GCTGTGTCAT
ACTGCAGCGC GTCCGGTAAA CAATCCAAAC GTGTCTGGTG CAGGCGATAC TTATATCAGT
GCATTTATGC TGGCCTGTCT TGCCGATGCC ATGCCTGCCA CCGCGGCAGA AGTAGCCGGT
GCAGCAGCAG CGGTAGCTAT CGGAAAGCGT AATACTGCAC ATTGCAAACA GGGAGAACTG
ATCGCTTATT TCTCTGCAAA AGATAAATAC GTCCGTAACA GTGAGGAGCT GGAAGCCTTG
TGTAACATGT ACAAAGCCCA GGGGAAGAAG ATCGTTTTCA CCAACGGTTG TTTTGATATC
CTGCACAGCG GGCATGTCAG TTACCTGGAA AGAGCGGCAG CACTGGGAGA TGTATTGATC
GTAGGGGTCA ATACAGATGA AAGCATTAAA CGGCTGAAAG GCACGGAGCG TCCAATCAAT
AGCCTGAATG ATCGTGTACA GGTGCTGGCT GGTTTAGGCG CCATTACGCA TCTTATATCT
TTTGGCAGCG AAGAAAATGA TACACCGGAA CCATTGATCA GGATTGTCCA GCCTGCGGTA
TTCGCAAAAG GTGGAGATTA TAGCAGGGAA TCGCTGCCGG AAGCCGCCGC TGTGGAGGCG
TATGGAGGAG AAGTCGTTCT GTTGCCACTT GTACCGGACC GTTCCACCAC TCAGATCATT
AAACGTATCT ATACAACGCC TGTTTTAAAA GTAGCGGAGG CATAA
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| Protein sequence | MELIYQTLIR SFVQPAILVV GDLMIDTYLR GASTRLSPEA PVPVVDISSQ TSVLGGGANA
AVNLRNLGAN VTFVSLTGDD YAAGLAAELL EREGISNEVI RCNTRRTITK TRVIAGQQLL
TRYDEGTEVQ PDEDCERQLI AMLEQQLPLH DAILIADYNK GLITKGIIDA LEQMNHVHKK
FIAVDAKQLS RYKQLQPDLV KPNYKEAVAL LGLQELATCK ARQMEEMGAA IFDATNARIT
ALTLDEEGAL IFREDKLLCH TAARPVNNPN VSGAGDTYIS AFMLACLADA MPATAAEVAG
AAAAVAIGKR NTAHCKQGEL IAYFSAKDKY VRNSEELEAL CNMYKAQGKK IVFTNGCFDI
LHSGHVSYLE RAAALGDVLI VGVNTDESIK RLKGTERPIN SLNDRVQVLA GLGAITHLIS
FGSEENDTPE PLIRIVQPAV FAKGGDYSRE SLPEAAAVEA YGGEVVLLPL VPDRSTTQII
KRIYTTPVLK VAEA
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