| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5020 |
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| Symbol | |
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| ID | 8361196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6270780 |
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| End bp | 6271952 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967169 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003124654 |
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| Protein GI | 256424001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.850855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.118195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA CTCCCAGGTC CGCCCGGCTC GCGACCGCTG CCTTTTTCTT CATCTCCGGC
TTCAGTTTTT CCAGCTGGGC GTCCAGGATA CCTGATATTC AACGTCAACT TTCCTTAAAC
AAGGCCCAAT TAGGCTTCTA CCTGTTTGCA CTGCCGATCG GCCTGGTATT GACGCTGCCG
GTTACCGGTT ACCTTTTACA GCGGCATAGC AGCCGGAATA TTATGATGAT CGGGGTATTG
GTCTTCAATC TGATGCTGGC AATGATCGGG GTTGTAAATG AGCCCTGGCA GCTGGGGCTG
GTGCTTTTCT GCTTCGGTTC CTCCCGGAAT CTGATGAATA TTTCTGTAAA TGCACAATCT
GTTGCCGTCC AGGCATTGTA TAATCGGTCA ATAATTACTA CTTTTCATGG AGTATGGAGC
CTGGCAGGTT TTGCTGCCGC AGCAGTAGGT GCTGTGATGG TCGATGTGAA GATAACACCG
GCCTGGCATT TCCTGGTAGT GGCGATATTG ATGACCATCA TGGGTTTTCT GGCATTCCCG
GACAGTCCGC ATGAACCGCC CAGGAAACAG GCCGATACCA AACGTTTTAT CTGGCCCGAC
AAACACCTGA TGAAGTATGG GCTGATATCA TTTGCCGTCA TGGCATGTGA GGGGACAATG
TACGACTGGA GCAATATCTT CTTCCAGGAA GCAGTACATC CGCCGGAGAA ACTGATCGCC
GCCGGCTATG TCATTTACAT GATTGCCATG AGTACCGGAC GTTTTACCGG AGACAGGCTT
GTCAACCGCC TGGGTATACC AACCATGATC AGGTACAGCG GCATACTGGT TCTCTGCGGA
TTCCTGGTGT CAGCTGTGTT ACCGCATACG CTCTCTGCCA GTATCGGTTT TATGATGATC
GGTTTCGGTG TTTCCTGTGT GGTGCCGCTG GTACTGCGGA TGGCCACTAT GAACACCAGC
TTGAGCAGTG GTGCTGCCAT TGCGGCCGTC TCTACCGTAG GCTATATGGG ATTCCTGGTG
GTACCGCCTG TAGTCGGTTT TCTGGCCGAA GGTTTAGGTA TCAGATGGGC ATTCGCCGTA
ATGGCCCTTT TTGGTGTACT GATCACCGTC CTGATATTAC AGATAAAAGA AACAACACAA
AAAACTACAT TAACAGATAA TCTAAAATCG TAA
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| Protein sequence | MTTTPRSARL ATAAFFFISG FSFSSWASRI PDIQRQLSLN KAQLGFYLFA LPIGLVLTLP
VTGYLLQRHS SRNIMMIGVL VFNLMLAMIG VVNEPWQLGL VLFCFGSSRN LMNISVNAQS
VAVQALYNRS IITTFHGVWS LAGFAAAAVG AVMVDVKITP AWHFLVVAIL MTIMGFLAFP
DSPHEPPRKQ ADTKRFIWPD KHLMKYGLIS FAVMACEGTM YDWSNIFFQE AVHPPEKLIA
AGYVIYMIAM STGRFTGDRL VNRLGIPTMI RYSGILVLCG FLVSAVLPHT LSASIGFMMI
GFGVSCVVPL VLRMATMNTS LSSGAAIAAV STVGYMGFLV VPPVVGFLAE GLGIRWAFAV
MALFGVLITV LILQIKETTQ KTTLTDNLKS
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