| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5008 |
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| Symbol | |
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| ID | 8361184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6260419 |
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| End bp | 6261315 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967157 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124642 |
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| Protein GI | 256423989 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0468951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00252787 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGTAG TGAACGTGAA TAATCGCAAT CAATATGCAC TGATTACCGG TGCCACCAGT
GGATTCGGAT ATGAATTAGC AAAATTGTTT GCCGGAGACG GTTATAGTCT GATACTTGTG
GCGCGCTCTG AAGAACGTCT GCAGGAAGTC GCTACCGAAC TGAAACAGCA GTATTCAGTG
GAAGTGACAC CTATTTCCGC AGACTTATTC AGACCGGAAG CTGCAAAGGA AATATATGAC
GAAGTACAGG CAAGAGGTAT TGTGGTAAAT TACCTGGTGA ATGACGCCGG ACAGGGAGAA
TGGGGTAAAT TTATTGATAT AGATCTGCAA CGAAGCCTTG ATATCATACA ATTAAATATT
TCTTCGCTGG TGGCGCTAAC AAAGTATTTT GCTACTGATA TGGCGGCACG TGGAGAAGGG
CATATTTTAC AACTGGGTTC TGAAGCAGGG AAGGCGCCTA TGCCACTATT ATCAGTATAT
GCGGCAACAA AAGCATTCGT TATCTCTTTC AGCGCTGCCA TCAGCAATGA ACTGGAAAGT
TCCGGTGTAC ATGTAACCGT ACTGCTGCCC GGAGCTGCGG ACACCGACTT TTTCCATAAA
GCAAATATGG AACATACGAA AACTTATAGG GAAGAGTCTT TGCAGACGCC GGAAGAAGTG
GCCAAAGATG GCTATGAAGC TTTGATGAGT GGCGAAAGTC GTGTAATATC CGGCGGCAAG
ACAAAGATGC ATGTTTATAT GGCTAACCTG ATGAGTGATG ATGCAAATGC GGTAAACATG
CGTAAACTAA TGGAGCCGTC AACTAAAGAA GACGGTAGAG AACATGCAGA TCATGGACCA
TCCCGAAGGG AAAGAGAAGC GATTGGACAT GCGTCGGGAG ATCTGGAAGA GAGATAG
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| Protein sequence | MPVVNVNNRN QYALITGATS GFGYELAKLF AGDGYSLILV ARSEERLQEV ATELKQQYSV
EVTPISADLF RPEAAKEIYD EVQARGIVVN YLVNDAGQGE WGKFIDIDLQ RSLDIIQLNI
SSLVALTKYF ATDMAARGEG HILQLGSEAG KAPMPLLSVY AATKAFVISF SAAISNELES
SGVHVTVLLP GAADTDFFHK ANMEHTKTYR EESLQTPEEV AKDGYEALMS GESRVISGGK
TKMHVYMANL MSDDANAVNM RKLMEPSTKE DGREHADHGP SRREREAIGH ASGDLEER
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