Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5000 |
Symbol | |
ID | 8361176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6251985 |
End bp | 6252686 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967149 |
Product | DSBA oxidoreductase |
Protein accession | YP_003124634 |
Protein GI | 256423981 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.324442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0420894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG AGATCTGGTC AGATATCATG TGTCCCTGGT GCTACATCGG CAAACGCCGG TTTGAAGCCG CTATGGAACA ATTTCCTGAC GCCGGATCTG TAGAAATAGA ATGGCACAGT TTCCAGCTGG ATCCTACCAT CGAGTCAGGA CACGGCGACA ACCTGTATAC CTACCTGTCC AAAAGAAAGG GCATCCCTTA CGAACAGGCA GAACAGATGA ATAACCAGGT AACAGGATTA GCAGCGACCC TCGGACTGAC TTACAATATG GAACAGGCGG TTGTAGCCAA CTCCTTTGAC GCCCACAGGC TGATACAGCT GGCTAAAAAA CACCAGTTGG GCGATGCTGC CGAAGAAAGA TTATTTAAGG CTTATTTCAC CGAAGGAAAG GATTTCAGTA ATCCGGATAC CCTGGTGGCC CTGGGTAAGG AAATCGGTCT GGAAGAAAGC GTATTAAAAA ACCTGGTTGG TAGTCAGTCA TTTACAACGG AAGTACGTCG TGATATCGAT GAAGCAGAAA CACTGGGTAT CAGAGGCGTT CCTTTCTTCG TTTTTGACAG GAAATATGGT GTTTCCGGCG CACAGGCCTC CGAAACCTTC CTGGAAGTGC TGACGAAATC TGTAGGTGAA TGGAAAAGTA CGCAGCCTTC AGATCTGGAG ATCATAGAAG GTCAAACCTG CGGACCAGAC GGAGATTGCT AG
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Protein sequence | MKVEIWSDIM CPWCYIGKRR FEAAMEQFPD AGSVEIEWHS FQLDPTIESG HGDNLYTYLS KRKGIPYEQA EQMNNQVTGL AATLGLTYNM EQAVVANSFD AHRLIQLAKK HQLGDAAEER LFKAYFTEGK DFSNPDTLVA LGKEIGLEES VLKNLVGSQS FTTEVRRDID EAETLGIRGV PFFVFDRKYG VSGAQASETF LEVLTKSVGE WKSTQPSDLE IIEGQTCGPD GDC
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