Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4964 |
Symbol | |
ID | 8361140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6210864 |
End bp | 6212015 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967113 |
Product | protein of unknown function DUF323 |
Protein accession | YP_003124598 |
Protein GI | 256423945 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.238732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA AAAATGATTT TAACACCGTG CGGAAAAGGT CCATGCATAT CTGCGCACCC CTGAAAACAG AGGACTATGT GGTTCAGCCG GTCGTTGATG TGAGTCCGCC GAAATGGCAT CTCGGACACA CGACCTGGTT CTTCGAAACT TTTCTGCTGA AGCCGCATTT TCCGGGTTAC AAAGAATTTG ATCCGAACTA TAATTTCGTA TTCAACAGTT ACTATGAAAC AGTAGGCGCC CGCGTGATAC GCACAGACAG AGGCAACCTA AGCCGCCCCG CTGTGGAAGA CGTTATGCGC TATCGTGAGC ATGTCGACAA AGCCATGCAG GCATTCCTGG ATACACCATT GTCTGACGAA CTGAAAACAC TGGTTGTACT CGGCCTCAAT CACGAGGAAC AACACCAGGA ACTACTGTAT ACGGACATTA AGTTCATCCT GGGGCACAAC CCGCTGATGC CCGCCTATTC TGATACGCTG GTCGATAACT ACATCGCGCC CGCTACAGAA AAACCATTCG TGGAAATGGA AGCAGGCCTC TATGACATCG GTTATAAAGG CGACGGTTTC TGTTTTGATA ATGAACTGGG CAGACATACC GTCTATCTCC AGCAATATAG CATTGCCTCC CAACCGGTGA CCAACGGAGA ATACCTGGAA TTCATGGAAG CAGGCGGCTA TACAGACTTC CGTCACTGGC ACGCAGAAGG CTGGGACTGG GTAAAGAAAA ATGAAGTAAA AGCGCCGCTT TACTGGCATC ATGTGGATGG CAAATGGCAA CATTATAACT GGCAGGGACT CCAGCCAATA AATGAAAATG AGCCTGTTTG TCACATCAGC TATTATGAAG CCACCGCTTA TGCCGCATGG AAAGGTTTCC GGCTGCCAAC CGAATTTGAA TGGGAAGCAG CATCGGCACA ATTTTCCTGG GGACAAAGAT GGGAATGGAC GGAAAGTGCA TACCTCCCTT ATCCAGGCTT TGTAAAAGCT CCCGGCGCCA TTGGCGAATA CAACGGCAAA TTCATGGTCA GTCAGATGGT ATTGCGTGGT GGTTCGGAAG TAACGCCTCC CAATCATAGC CGCGATACCT ACCGGAACTT CTTCCATCCT TCATTGAGAT GGCAGTTTAC CGGCATCAGA CTGGCAAAAT AA
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Protein sequence | MQLKNDFNTV RKRSMHICAP LKTEDYVVQP VVDVSPPKWH LGHTTWFFET FLLKPHFPGY KEFDPNYNFV FNSYYETVGA RVIRTDRGNL SRPAVEDVMR YREHVDKAMQ AFLDTPLSDE LKTLVVLGLN HEEQHQELLY TDIKFILGHN PLMPAYSDTL VDNYIAPATE KPFVEMEAGL YDIGYKGDGF CFDNELGRHT VYLQQYSIAS QPVTNGEYLE FMEAGGYTDF RHWHAEGWDW VKKNEVKAPL YWHHVDGKWQ HYNWQGLQPI NENEPVCHIS YYEATAYAAW KGFRLPTEFE WEAASAQFSW GQRWEWTESA YLPYPGFVKA PGAIGEYNGK FMVSQMVLRG GSEVTPPNHS RDTYRNFFHP SLRWQFTGIR LAK
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