Gene Cpin_4956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4956 
Symbol 
ID8361132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6201285 
End bp6201917 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID644967105 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003124590 
Protein GI256423937 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0148893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.105583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATTATA CATTCCTGAA AGACCTGATC GTTCTCGCTG AAGAATATGA ACGATCGACG 
GGTAAGGAGC CAAAAACAAA TGACTTCATT GCCTGGTTAC AAACAAGGGA ACTACCGCCG
GTCCCTTTTC ACGACACACC GCTTACAAAA GAAGGATATG GCGATGCACA TACGCCTGGA
CTGATCAGTA AACTGATCGT TTATATGTAC CGTTATGCCA AACTGTATAT AAAGAGAGCA
CTGGAAGGAT CTCCCCTTCA GTCGATGGAC GAATTCGGAT ACATGGTTTC CCTGCTGCAA
TATGAACCTA TGAACAAAAC AGCGTTGATA CAGCAGAACA GGCATGAAAA GCCCACCGGT
ATGGAGATTA TCAAAAGGCT GGTAAAACTG GGCTATATGG AAGAAACCAT ACATAAAGAA
GATAAACGCA GCAAGGCGCT GCGCGTAAGC GTAAAAGGCA GGGAATTGCT GGCTGGCCTG
TACGGCAATA TGGATAAGAT CTCCCGGCTG ATACTGGGCG ACCTCAGTCC CCTGGAACAG
TATCGGCTGG TAGTGACCTT ACAACGGCTG GACGACTATC ACCATCCTAT CTTTATGGAT
AATCTTTCCA GACTGGATGA TCTACTGGAA TAA
 
Protein sequence
MDYTFLKDLI VLAEEYERST GKEPKTNDFI AWLQTRELPP VPFHDTPLTK EGYGDAHTPG 
LISKLIVYMY RYAKLYIKRA LEGSPLQSMD EFGYMVSLLQ YEPMNKTALI QQNRHEKPTG
MEIIKRLVKL GYMEETIHKE DKRSKALRVS VKGRELLAGL YGNMDKISRL ILGDLSPLEQ
YRLVVTLQRL DDYHHPIFMD NLSRLDDLLE