Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4956 |
Symbol | |
ID | 8361132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6201285 |
End bp | 6201917 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967105 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003124590 |
Protein GI | 256423937 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0148893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.105583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGATTATA CATTCCTGAA AGACCTGATC GTTCTCGCTG AAGAATATGA ACGATCGACG GGTAAGGAGC CAAAAACAAA TGACTTCATT GCCTGGTTAC AAACAAGGGA ACTACCGCCG GTCCCTTTTC ACGACACACC GCTTACAAAA GAAGGATATG GCGATGCACA TACGCCTGGA CTGATCAGTA AACTGATCGT TTATATGTAC CGTTATGCCA AACTGTATAT AAAGAGAGCA CTGGAAGGAT CTCCCCTTCA GTCGATGGAC GAATTCGGAT ACATGGTTTC CCTGCTGCAA TATGAACCTA TGAACAAAAC AGCGTTGATA CAGCAGAACA GGCATGAAAA GCCCACCGGT ATGGAGATTA TCAAAAGGCT GGTAAAACTG GGCTATATGG AAGAAACCAT ACATAAAGAA GATAAACGCA GCAAGGCGCT GCGCGTAAGC GTAAAAGGCA GGGAATTGCT GGCTGGCCTG TACGGCAATA TGGATAAGAT CTCCCGGCTG ATACTGGGCG ACCTCAGTCC CCTGGAACAG TATCGGCTGG TAGTGACCTT ACAACGGCTG GACGACTATC ACCATCCTAT CTTTATGGAT AATCTTTCCA GACTGGATGA TCTACTGGAA TAA
|
Protein sequence | MDYTFLKDLI VLAEEYERST GKEPKTNDFI AWLQTRELPP VPFHDTPLTK EGYGDAHTPG LISKLIVYMY RYAKLYIKRA LEGSPLQSMD EFGYMVSLLQ YEPMNKTALI QQNRHEKPTG MEIIKRLVKL GYMEETIHKE DKRSKALRVS VKGRELLAGL YGNMDKISRL ILGDLSPLEQ YRLVVTLQRL DDYHHPIFMD NLSRLDDLLE
|
| |